Gene OSTLU_5426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5426 
Symbol 
ID5002954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp196697 
End bp197386 
Gene Length690 bp 
Protein Length230 aa 
Translation table 
GC content55% 
IMG OID640418375 
Productpredicted protein 
Protein accessionXP_001418637 
Protein GI145348401 
COG category[R] General function prediction only 
COG ID[COG5210] GTPase-activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0224644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GACTCTGCGC TGAAACGAGC GGTGAGGAAG GGCGTGCCGA GCGATCTGCG ATGCGAGGCG 
TGGTTCGCGT GCAGCGGCGC GCGCGAGCTG AAAAAGATGG GACCGATGGA TTCGTATTAC
GAAAAATTGT TGGTGATGAA GGTGGATCAA AAAGTCGTCG ACCAAATCGA GTTGGACTTG
GCGAGGACGT TTCCGGCGAA CGAAAAGTAT GAGCGGGGCG AGGGGGGACA GCGAGGGAAC
GATGTGTTGC GAAGGATGCT GTACGCGTAC GCGAGACATA ATCGAAAGAC GGGGTATTGT
CAGGGAATGA ATTATATCGC GGCGTTTTTA TGGCTCGTCA TGGGCGACGA GGAAAAGGCG
TTTTGGACGT TTACCGCTTT GCTCGACGTC GTGCTTCCGA GCGATGTGCA CGCGAGGGAC
ATCAAGGGGA CGATTTCGCA GTACAAGATT TTGCATAAAC TACTGCAATC AAACGTCCCA
AAGGTGGCGA GGCATCTGAA AGAGCTCGAC GTCGACCTCG TCATGATCGC GAGCAAGTGG
TTGTTGTGTC TCTTCGTCGA ATCGTTTCCG GCGACGACGG CGGCGCGCGT CCTCGACTGC
CTCACGTACG AGGGCGAAAA GGTGTGGTTC AGAGTCGCGA TCGCGATGAT GAAAATGTAC
GAGCGCGACA TATTGGAGTG CGATTCGTTA
 
Protein sequence
DSALKRAVRK GVPSDLRCEA WFACSGAREL KKMGPMDSYY EKLLVMKVDQ KVVDQIELDL 
ARTFPANEKY ERGEGGQRGN DVLRRMLYAY ARHNRKTGYC QGMNYIAAFL WLVMGDEEKA
FWTFTALLDV VLPSDVHARD IKGTISQYKI LHKLLQSNVP KVARHLKELD VDLVMIASKW
LLCLFVESFP ATTAARVLDC LTYEGEKVWF RVAIAMMKMY ERDILECDSL