Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_5426 |
Symbol | |
ID | 5002954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | + |
Start bp | 196697 |
End bp | 197386 |
Gene Length | 690 bp |
Protein Length | 230 aa |
Translation table | |
GC content | 55% |
IMG OID | 640418375 |
Product | predicted protein |
Protein accession | XP_001418637 |
Protein GI | 145348401 |
COG category | [R] General function prediction only |
COG ID | [COG5210] GTPase-activating protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0224644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GACTCTGCGC TGAAACGAGC GGTGAGGAAG GGCGTGCCGA GCGATCTGCG ATGCGAGGCG TGGTTCGCGT GCAGCGGCGC GCGCGAGCTG AAAAAGATGG GACCGATGGA TTCGTATTAC GAAAAATTGT TGGTGATGAA GGTGGATCAA AAAGTCGTCG ACCAAATCGA GTTGGACTTG GCGAGGACGT TTCCGGCGAA CGAAAAGTAT GAGCGGGGCG AGGGGGGACA GCGAGGGAAC GATGTGTTGC GAAGGATGCT GTACGCGTAC GCGAGACATA ATCGAAAGAC GGGGTATTGT CAGGGAATGA ATTATATCGC GGCGTTTTTA TGGCTCGTCA TGGGCGACGA GGAAAAGGCG TTTTGGACGT TTACCGCTTT GCTCGACGTC GTGCTTCCGA GCGATGTGCA CGCGAGGGAC ATCAAGGGGA CGATTTCGCA GTACAAGATT TTGCATAAAC TACTGCAATC AAACGTCCCA AAGGTGGCGA GGCATCTGAA AGAGCTCGAC GTCGACCTCG TCATGATCGC GAGCAAGTGG TTGTTGTGTC TCTTCGTCGA ATCGTTTCCG GCGACGACGG CGGCGCGCGT CCTCGACTGC CTCACGTACG AGGGCGAAAA GGTGTGGTTC AGAGTCGCGA TCGCGATGAT GAAAATGTAC GAGCGCGACA TATTGGAGTG CGATTCGTTA
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Protein sequence | DSALKRAVRK GVPSDLRCEA WFACSGAREL KKMGPMDSYY EKLLVMKVDQ KVVDQIELDL ARTFPANEKY ERGEGGQRGN DVLRRMLYAY ARHNRKTGYC QGMNYIAAFL WLVMGDEEKA FWTFTALLDV VLPSDVHARD IKGTISQYKI LHKLLQSNVP KVARHLKELD VDLVMIASKW LLCLFVESFP ATTAARVLDC LTYEGEKVWF RVAIAMMKMY ERDILECDSL
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