| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_50098 |
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| Symbol | |
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| ID | 5002784 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009361 |
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| Strand | - |
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| Start bp | 634425 |
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| End bp | 636786 |
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| Gene Length | 2362 bp |
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| Protein Length | 572 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 640418205 |
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| Product | predicted protein |
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| Protein accession | XP_001418998 |
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| Protein GI | 145349140 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | [TIGR01628] polyadenylate binding protein, human types 1, 2, 3, 4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.442075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.11137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCG CGACGGCGAC GAACGTGACG AACGATGCGA AAGCGTCGAA CGCGACGGCG
AACGCGGATG GGACGACGCC CGCGGCGCAA CAACCGGGGG CGGGGACGAG CTCGCTGTAC
GTCGGGGACC TGGAGACCTC GGTGACCGAG GCGCAGCTGT ACGAAAAGTT CTCATCCATC
GGACCGGTGG TGTCGATTCG GGTGTGCCGG GATTTGATCA CGCGACGATC GCTCGGGTAC
GCGTACGTGA ACTTTCAATC GCCGAACGAT GCGGCGCACG CGATTGATGT GTTGAACTTT
CAAGTCATCA ACGGGAAGCC GATTCGCGTG TTGTACTCGC AGCGAGATCC GGCGGTGCGA
AGATCTGGCG TGGGGAACAT CTTCATCAAG AATCTCGATA AGGCGATCGA CAACAAGGCG
TTGCTCGATA CCTTTGCGCA GTTCGGGACG ATCACGAGCG CCAAGGTGGC GATGGATGGC
CAAGGGAACT CGAAGGGCTA CGGCTTCGTG CAATTCGAGA CCCAAGAGGC GGCGCAGGCG
GCGATTGACA ACGTCAACGG TATGGAACTG AACGACAAGC AAGTGTACGT CGGTCCGTTC
CAACGCCGTG CCGAGCGCTC GAACACCGGC GAAGCCAAGT TTAACAACGT CTATGTTAAG
AACTTGAGCG AAAACTTGAG CGACGAAAAG TTGCGTGAAA AGTTTGCCGA GCACGGCGCG
GTGACGAGCT GCGTCATCAT GCGCGACGAA GAAGGCAAGT CTAAGGGCTT CGGCTTCGTG
TGCTACGAAG AACCTGAAGG CGCGGCGGCC GCGGTCGAAA AGCTCGACGG GTACACCGAG
GATGAAAAGA CTTGGGTTGT CTGCCGAGCG CAAAAGAAGG CTGAGCGCGA AGCCGAATTG
AAGGCCAAGT TCGACCAAGA ACGCCGTGAA CGCATGGAAA AGATGGCGGG CGCCAACCTC
TACATCAAAA ATCTTGAGGA CGGCACCGAC GATGAAAAGC TTCGCGAATT GTTCAAGGAG
TTTGGCACCA TCACCTCTTG CCGCGTCATG CGTGACGCCT CGGGCGTTTC TCGCGGTTCC
GCGTTCGTCG CCTTCTCTTC TCCCGACGAA GCCACCCGCG CGGTGACGGA GATGAACGGT
AAGATGGTCG GTGCCAAGCC GCTCTATGTC GCTCTCGCGC AACGCAAGGA AGAACGCCGC
ATGCGTCTCC AAGCGCAATT CGCGCAGCGC ATGCCGGGCG CCGGTATGCC GGGTGGCATG
GCTCCGTACA TGCCGCCGCC GGGCGTGCCA GGTGCTCCTA TGTACTACGG CCAACCGCCT
CCGGGTATGA TGCCGCCGCA ACCGCAACCA GGCTTCGGTT TCCAACCGGT GATGCCGGGC
GGACCGCGAC CGGGCATGCC GGGCATGCCG GGTTACGGCA TGCCGATGCC GCAACGCCAA
GGCGTTCCGG GCGCCCAGCG TGGCCGTGGT GGCCGAGGTG GCCCGGCCGG TGGCCGTGGC
CAGCGTCAAA ACATGCGATA CAACGCCGCC GCGGCTATGC CGATGCCGCC GATGCCGGCG
GAGGCGGCTA ACCCGATGGC TATTCTCGCT TCTCAGCTCT CCGCCGCCGC TCCGGATCAA
CAGCGCATGA TTCTTGGTGA AGCCCTCTAC CCGCTCATTG AGAGCAAGGA CGCCGCCAAC
GCCGCAAAGA TCACGGGTAT GTTGCTCGAG ATGGACCAGT CGGAGGTCCT TCACTTGATC
GAGTCTCCGG ACGCGCTCAC CTCCAAGGTT CAAGAAGCCC TCGCTGTGCT GAAGGCTGCC
GCCGAGGAAG GTGCGTAATC GCTCCGTCGA TGAAGTATGC ACTTCAAACT CAGTGAGTGA
GGATACGTTT GGTATGAGAA TTCTTTGGCG AGTCTTCTCG TGCGCGCGCA CGAGAAGAGG
CACAACATTT TTAGCGAGCT GCGGGCCGCG CGAGCGCGAG CGAGCTGTCG CGATATTTCA
TCGCGACGTC TCGTCGACGC TTTGACGCGG CCCGCGGCAA CGATACGATA GCACCAATAG
GCGGGCGCCA TTGGGGGGTG CGAGACGGTA TTTCTTTTGT CTATGCGCTC AACCGCGACC
ATGGTGTCCA CAGCCGCCGC GAGAATCACG AATGCTCTCG CCGCGAGCCG ACTGCGGACC
AGAAACTAGC GTGATGGACT CCATCACGTG CATGAAAAAA ACGAAAAAAA AAGGGCGACG
CTGTTGCGCT TTTGAGCCAA GAACAGGTCG CAGTATCAAG ACTTTAAGAC GCATACGTTG
CTGTCTGCAC TTTTGACTCT CGAAATCCAC CAATACGAGC AGCAAATTTT CAAAATATCG
ATACAAAAAA TACAACTCTC TA
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| Protein sequence | MSAATATNVT NDAKASNATA NADGTTPAAQ QPGAGTSSLY VGDLETSVTE AQLYEKFSSI
GPVVSIRVCR DLITRRSLGY AYVNFQSPND AAHAIDVLNF QVINGKPIRV LYSQRDPAVR
RSGVGNIFIK NLDKAIDNKA LLDTFAQFGT ITSAKVAMDG QGNSKGYGFV QFETQEAAQA
AIDNVNGMEL NDKQVYVGPF QRRAERSNTG EAKFNNVYVK NLSENLSDEK LREKFAEHGA
VTSCVIMRDE EGKSKGFGFV CYEEPEGAAA AVEKLDGYTE DEKTWVVCRA QKKAEREAEL
KAKFDQERRE RMEKMAGANL YIKNLEDGTD DEKLRELFKE FGTITSCRVM RDASGVSRGS
AFVAFSSPDE ATRAVTEMNG KMVGAKPLYV ALAQRKEERR MRLQAQFAQR MPGAGMPGGM
APYMPPPGVP GAPMYYGQPP PAGHAGQGVP GAQRGRGGRG GPAGGRGQRQ NMRYNAAAAM
PMPPMPAEAA NPMAILASQL SAAAPDQQRM ILGEALYPLI ESKDAANAAK ITGMLLEMDQ
SEVLHLIESP DALTSKVQEA LAVLKAAAEE GA
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