Gene OSTLU_50090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_50090 
Symbol 
ID5002746 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp29065 
End bp31588 
Gene Length2524 bp 
Protein Length745 aa 
Translation table 
GC content51% 
IMG OID640418167 
Productpredicted protein 
Protein accessionXP_001418588 
Protein GI145348296 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5647] Cullin, a subunit of E3 ubiquitin ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC GACGCGTGAT CGCGCTTGAA GATGGTTGGG GGAACATGGA GGTGCGTCGA 
CGGACGATTT GGAATCAAAC GCTCGAGGAC GCCGAGAGCT CGCGAGGCGC GGGAGAAACG
AGACGTACTG ACGAGATCGT GACGTTTGAC GACGCGCAGG ATGGTATCAT GAAACTTAGA
CGCATTCTAG ATCAGGAGGA TGCGGAATCG TTCACGTCGG AAGAGTACAT GAATCTTTAC
ACGTGCGTAG GACGACGCGT TGACCGCTCG CGGGGCGGTT GGGGGCGCGC GCTCGCGCGC
TCGCGCTCAA AGACCCCCCG AAACAAGTGG CGCGGTGATC GCATGGACTG ACGCAATCCA
ACAACATTTA CACGTTCTTG CAGGACGATT TACAACATGT GCACGCAGAA GGCGCCGTAC
GATTTTTCCG AAGAGTTGTA CAAGCGCTAC GAGGCCGCGT TTAACCAATA CATCAACTCA
AAGGTTTTAC CGGCGCTCGT GGAAAAAAAG GGAGAGTACA TGCTGAGAAG CTTGATGAGT
CGATGGGAAA ATCACAAGAT AATGGTTCGC TGGCTGTCTC GGTTCTTCAA CTATCTCGAC
AGATACTACG TCCAGCGCCA TCACTACGCG ACACTCAATC AAGTCGGCGT GGGTTGCTTC
CGAAGACTGG TGTACGAAGA AATCAAGCCG AGCATGAAGA CGGCGGTGTT GGCCCTCATA
GACAAAGAGC GAGAAGGAGA AAAAAGTGAT AGAGGTCTCA TCAAGAGCAT CACGTCAATC
TTCGTCGAGA TGGGGTTGGG TACGATGGAC GCATACCAAA ACGATTTCGA AAACGACTTG
CTCACGCACA CATCATCATT TTACACTCGC AAGGCGACGC AGTGGATCGC TGAAGACTCG
TGTCCGGCGT ATCTCATCAA AGCGGAAGAG TGTTTGCATA GCGAACGCGA ACGTGTGCAA
CAATACTTGC ATCAGAGCAC CGAGTCGAAG TTGATATCAA AGGTTGAGCA GCAGCTCCTC
GAGCAGTACG AAACTGAGCT GCTGGAAAAG GAGAATAGCG GTTGCGCAGC GCTCTTGGTT
GACGACAAGA AGGAGGACCT AGCCCGCATG TTCCGTCTCT TTAGCTCGGT ACCGAAAGGA
TTGGCGCCGA TAGCTCAGAT TTTCAAAACG CACGTTCAAA AAGAAGGGAT GAGCCTGGTG
AATTCCGCCG AACAGGCGGC GGCGGCGATG AAAGGGAACA AGGAAAAGCC GACGACGTCT
ACGTCGATTG AACAGGTCTT TACTCGAAGT GCGATCGACC TGTACGACAA ATATAGTGGT
TATGTGAACG ATTGCTTTGG TTCCAACGCA CTCTTCAACC GCGCGCTCAA GGAGGCTTTT
GAATACTTCT GCAACAAGGG CATCGGTGAA ATCTCGACGG CGCAGCTACT CGCAGATTTT
GCGGATAAGC TGTTGCGAAA GGGTGGGAGC GAAAAGTTGA GCGATGAGAA GATGGAAGAG
ACGCTGGATA AAGTTGTGAA GCTCTTGGCA TACATCAGCG ATAAGGATAT GTTTGGGGAG
TTTGCTAGCA AAAGGCTTTC TCGACGCCTG TTGCAAGACA CGTCTGCGAG TCAGGATTAT
GAGCGCTCCA TCTTGAGTAA ACTCAAGACG TCGTGCGGCG CGCAGTTTAC ATCGAAGATG
GAGGGTATGG TGAATGATGT GCAGTCTGCG CGAGACACTC AAGATGTGTT TGAGAGATGG
GTAGACGAAG ACGCTGCTAA TCGCAAGACT TGCATCGATT TCAACGTCAC CATCTTGACG
CACGGTTTCT GGCCTTCATG GAAGCCCATC CAGGTGGAGC TGTGTGACGA GTTCGCGCAG
TGTGTGGAAA CGTTTCAAAC TTTCTATGAT GCTAAGATGA GCCAAAGAAA GCTCACGTGG
GTGCATCAAC TCGGAGCAGT CGTGCTAAAC GTCAAGTACG AAGCCAAGAC TATAGAAATG
CACATGCAAA CGCCCCAATG CTCTGTTTTG TTGCTCTTTC GGAATGAAAA AGAGCTGTCG
ATGCAAAAGG TCATAGAAAA GACAAAAATG CCAGCTGATG CCGTGAAGCG AGCGCTCTAT
TCGCTCTCGT GTGCCAAGTA TAAGATTCTG AACAAGTCCC CCGAGGGCAA GACGGTGAAT
CCCGAAGACG TCTTTTCGTT TAACGAAAAA TTCACCGATC GTTCGCGACG CATCAAGATT
GCATTGCCAC CTCCCGATGA GAGAAAAGCT ACGATTGAGA ACGTCGTACA AGATCGCCGT
CATGCCATCG ATGCAGCCAT CGTGCGAGTG ATGAAGACTC GCAAGGCGTT GGCATACAAC
GAGCTCGTCG TCGAAGTCGT GAACCAACTC CAACAGAGCT TCCTCCCGGA AGCAAAGATG
ATCAAAATGC GAGTCGATGA CCTCATCAAC AAGGAATACA TCATGCGCGA CGAAGAAAAC
TCGCAAGTTT TCAAGTACAT CGCCTAGTTA GTTTACTGCA AATGAGAGAT ACGCGGCGCA
ACAC
 
Protein sequence
MSDRRVIALE DGWGNMEDGI MKLRRILDQE DAESFTSEEY MNLYTTIYNM CTQKAPYDFS 
EELYKRYEAA FNQYINSKVL PALVEKKGEY MLRSLMSRWE NHKIMVRWLS RFFNYLDRYY
VQRHHYATLN QVGVGCFRRL VYEEIKPSMK TAVLALIDKE REGEKSDRGL IKSITSIFVE
MGLGTMDAYQ NDFENDLLTH TSSFYTRKAT QWIAEDSCPA YLIKAEECLH SERERVQQYL
HQSTESKLIS KVEQQLLEQY ETELLEKENS GCAALLVDDK KEDLARMFRL FSSVPKGLAP
IAQIFKTHVQ KEGMSLVNSA EQAAAAMKGN KEKPTTSTSI EQVFTRSAID LYDKYSGYVN
DCFGSNALFN RALKEAFEYF CNKGIGEIST AQLLADFADK LLRKGGSEKL SDEKMEETLD
KVVKLLAYIS DKDMFGEFAS KRLSRRLLQD TSASQDYERS ILSKLKTSCG AQFTSKMEGM
VNDVQSARDT QDVFERWVDE DAANRKTCID FNVTILTHGF WPSWKPIQVE LCDEFAQCVE
TFQTFYDAKM SQRKLTWVHQ LGAVVLNVKY EAKTIEMHMQ TPQCSVLLLF RNEKELSMQK
VIEKTKMPAD AVKRALYSLS CAKYKILNKS PEGKTVNPED VFSFNEKFTD RSRRIKIALP
PPDERKATIE NVVQDRRHAI DAAIVRVMKT RKALAYNELV VEVVNQLQQS FLPEAKMIKM
RVDDLINKEY IMRDEENSQV FKYIA