Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_50090 |
Symbol | |
ID | 5002746 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | + |
Start bp | 29065 |
End bp | 31588 |
Gene Length | 2524 bp |
Protein Length | 745 aa |
Translation table | |
GC content | 51% |
IMG OID | 640418167 |
Product | predicted protein |
Protein accession | XP_001418588 |
Protein GI | 145348296 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5647] Cullin, a subunit of E3 ubiquitin ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC GACGCGTGAT CGCGCTTGAA GATGGTTGGG GGAACATGGA GGTGCGTCGA CGGACGATTT GGAATCAAAC GCTCGAGGAC GCCGAGAGCT CGCGAGGCGC GGGAGAAACG AGACGTACTG ACGAGATCGT GACGTTTGAC GACGCGCAGG ATGGTATCAT GAAACTTAGA CGCATTCTAG ATCAGGAGGA TGCGGAATCG TTCACGTCGG AAGAGTACAT GAATCTTTAC ACGTGCGTAG GACGACGCGT TGACCGCTCG CGGGGCGGTT GGGGGCGCGC GCTCGCGCGC TCGCGCTCAA AGACCCCCCG AAACAAGTGG CGCGGTGATC GCATGGACTG ACGCAATCCA ACAACATTTA CACGTTCTTG CAGGACGATT TACAACATGT GCACGCAGAA GGCGCCGTAC GATTTTTCCG AAGAGTTGTA CAAGCGCTAC GAGGCCGCGT TTAACCAATA CATCAACTCA AAGGTTTTAC CGGCGCTCGT GGAAAAAAAG GGAGAGTACA TGCTGAGAAG CTTGATGAGT CGATGGGAAA ATCACAAGAT AATGGTTCGC TGGCTGTCTC GGTTCTTCAA CTATCTCGAC AGATACTACG TCCAGCGCCA TCACTACGCG ACACTCAATC AAGTCGGCGT GGGTTGCTTC CGAAGACTGG TGTACGAAGA AATCAAGCCG AGCATGAAGA CGGCGGTGTT GGCCCTCATA GACAAAGAGC GAGAAGGAGA AAAAAGTGAT AGAGGTCTCA TCAAGAGCAT CACGTCAATC TTCGTCGAGA TGGGGTTGGG TACGATGGAC GCATACCAAA ACGATTTCGA AAACGACTTG CTCACGCACA CATCATCATT TTACACTCGC AAGGCGACGC AGTGGATCGC TGAAGACTCG TGTCCGGCGT ATCTCATCAA AGCGGAAGAG TGTTTGCATA GCGAACGCGA ACGTGTGCAA CAATACTTGC ATCAGAGCAC CGAGTCGAAG TTGATATCAA AGGTTGAGCA GCAGCTCCTC GAGCAGTACG AAACTGAGCT GCTGGAAAAG GAGAATAGCG GTTGCGCAGC GCTCTTGGTT GACGACAAGA AGGAGGACCT AGCCCGCATG TTCCGTCTCT TTAGCTCGGT ACCGAAAGGA TTGGCGCCGA TAGCTCAGAT TTTCAAAACG CACGTTCAAA AAGAAGGGAT GAGCCTGGTG AATTCCGCCG AACAGGCGGC GGCGGCGATG AAAGGGAACA AGGAAAAGCC GACGACGTCT ACGTCGATTG AACAGGTCTT TACTCGAAGT GCGATCGACC TGTACGACAA ATATAGTGGT TATGTGAACG ATTGCTTTGG TTCCAACGCA CTCTTCAACC GCGCGCTCAA GGAGGCTTTT GAATACTTCT GCAACAAGGG CATCGGTGAA ATCTCGACGG CGCAGCTACT CGCAGATTTT GCGGATAAGC TGTTGCGAAA GGGTGGGAGC GAAAAGTTGA GCGATGAGAA GATGGAAGAG ACGCTGGATA AAGTTGTGAA GCTCTTGGCA TACATCAGCG ATAAGGATAT GTTTGGGGAG TTTGCTAGCA AAAGGCTTTC TCGACGCCTG TTGCAAGACA CGTCTGCGAG TCAGGATTAT GAGCGCTCCA TCTTGAGTAA ACTCAAGACG TCGTGCGGCG CGCAGTTTAC ATCGAAGATG GAGGGTATGG TGAATGATGT GCAGTCTGCG CGAGACACTC AAGATGTGTT TGAGAGATGG GTAGACGAAG ACGCTGCTAA TCGCAAGACT TGCATCGATT TCAACGTCAC CATCTTGACG CACGGTTTCT GGCCTTCATG GAAGCCCATC CAGGTGGAGC TGTGTGACGA GTTCGCGCAG TGTGTGGAAA CGTTTCAAAC TTTCTATGAT GCTAAGATGA GCCAAAGAAA GCTCACGTGG GTGCATCAAC TCGGAGCAGT CGTGCTAAAC GTCAAGTACG AAGCCAAGAC TATAGAAATG CACATGCAAA CGCCCCAATG CTCTGTTTTG TTGCTCTTTC GGAATGAAAA AGAGCTGTCG ATGCAAAAGG TCATAGAAAA GACAAAAATG CCAGCTGATG CCGTGAAGCG AGCGCTCTAT TCGCTCTCGT GTGCCAAGTA TAAGATTCTG AACAAGTCCC CCGAGGGCAA GACGGTGAAT CCCGAAGACG TCTTTTCGTT TAACGAAAAA TTCACCGATC GTTCGCGACG CATCAAGATT GCATTGCCAC CTCCCGATGA GAGAAAAGCT ACGATTGAGA ACGTCGTACA AGATCGCCGT CATGCCATCG ATGCAGCCAT CGTGCGAGTG ATGAAGACTC GCAAGGCGTT GGCATACAAC GAGCTCGTCG TCGAAGTCGT GAACCAACTC CAACAGAGCT TCCTCCCGGA AGCAAAGATG ATCAAAATGC GAGTCGATGA CCTCATCAAC AAGGAATACA TCATGCGCGA CGAAGAAAAC TCGCAAGTTT TCAAGTACAT CGCCTAGTTA GTTTACTGCA AATGAGAGAT ACGCGGCGCA ACAC
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Protein sequence | MSDRRVIALE DGWGNMEDGI MKLRRILDQE DAESFTSEEY MNLYTTIYNM CTQKAPYDFS EELYKRYEAA FNQYINSKVL PALVEKKGEY MLRSLMSRWE NHKIMVRWLS RFFNYLDRYY VQRHHYATLN QVGVGCFRRL VYEEIKPSMK TAVLALIDKE REGEKSDRGL IKSITSIFVE MGLGTMDAYQ NDFENDLLTH TSSFYTRKAT QWIAEDSCPA YLIKAEECLH SERERVQQYL HQSTESKLIS KVEQQLLEQY ETELLEKENS GCAALLVDDK KEDLARMFRL FSSVPKGLAP IAQIFKTHVQ KEGMSLVNSA EQAAAAMKGN KEKPTTSTSI EQVFTRSAID LYDKYSGYVN DCFGSNALFN RALKEAFEYF CNKGIGEIST AQLLADFADK LLRKGGSEKL SDEKMEETLD KVVKLLAYIS DKDMFGEFAS KRLSRRLLQD TSASQDYERS ILSKLKTSCG AQFTSKMEGM VNDVQSARDT QDVFERWVDE DAANRKTCID FNVTILTHGF WPSWKPIQVE LCDEFAQCVE TFQTFYDAKM SQRKLTWVHQ LGAVVLNVKY EAKTIEMHMQ TPQCSVLLLF RNEKELSMQK VIEKTKMPAD AVKRALYSLS CAKYKILNKS PEGKTVNPED VFSFNEKFTD RSRRIKIALP PPDERKATIE NVVQDRRHAI DAAIVRVMKT RKALAYNELV VEVVNQLQQS FLPEAKMIKM RVDDLINKEY IMRDEENSQV FKYIA
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