Gene OSTLU_49993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_49993 
Symbol 
ID5002902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp528871 
End bp530625 
Gene Length1755 bp 
Protein Length521 aa 
Translation table 
GC content56% 
IMG OID640418323 
ProductABC(ABCB) family transporter: multidrug (P-glycoprotein-like protein) (ABCB) 
Protein accessionXP_001418734 
Protein GI145348600 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGACGCGAGA GCAGCCCGTT GCTCGTGGAC GTCGTCGCGG ACGATGATTT AGACGACGAC 
GACCCGACGA CGTCGTCTCT GGACGCGCGC GTCACCTTTA CGCAGCTGTT ATCGCTCGCG
AAACGCGAGT GGGACACGTT ACTCTTCGGG ACACTCAGTC TGCTCGTTCG CCTGCCGTTC
TCGGTGTCGA TGCCGCATTT CACGAGCGTC GCGATCGGGG CGTCGATTGA CGGCGATGAA
GCGCGATTTC GCGCCAACGT CACGCGGTTC CTGGTCGTTG GCGTGGTGAA CGGAGTTTTA
GACTTTAGCA ATGTGTTCCT CTTTGCGTTG GCGCAGAGTC GCGTGGCGAG GCGGTTGCGG
AATCGAGCGT TCGCGGCGAC GCTGAGGAAA AATATGGCGT ATTTTGATGC GAGAACGTCG
GGTAAAATAA ATTCGACGGT GACGAACGAT ACGAGCGCGG TGAGCGCGAA TTTGTCTTGG
CTGTTACGCA GCTGCGTGGA AGCGGTCGTC AGGTGCGTCG GTGTCGGCGC ATATCTTTTG
TTTTGGGTGA ACTTCGAGCT CGGTGCGTTG GCGCTCGTCG TGATACCGAT AACAAGCGTG
GTCAATTACT TCTATGGCAA GTTATTGAGC GCTAACGCAG AGTCAGTGCA AGAGACGTTG
GCGAAATCGA ACGGCGTGGC GCAAGAAACT ATTTCAAACA TCGTCACGGT GCGATCGTTC
GCGAACGAAC CGTTTGAACG CAGACGGTTC GGCGATGCCA TAGATGAGTG GTACGAGCAG
TCGTATCGCG CCGCGCAACT GTCAGGATGG TACTATTCGT TTATGTATTC GCTCGTGTCG
GCGTGTTTCG TGCCGGCGGC AATTCTGTAC GTAGGAGGTG GATTCGTCGT CGACGGCTCG
ATGCACGCCG AAAAGCTCGT TGCGACCATG CTTTATTCTG CGATTTTACA AGAGTATTTC
GGGAATCTTT TGAGCTCTTT TACGAATTTG TTCGCCGCGC GAGGTGCAGC GGCGGAATTG
TTCAAAGTTT TGGCCAAGAA CGAGCGAGAA GACGACGACG CGGACAATGG CGCGACGCTA
CCCATCGACG ACGTGAAGGG AGCAATATCG TTTTCAAACG TCTCCTTCTC GTATCCGACT
CGACCGGATA TTCCCGCGCT CTCGGGCGTG AGCTTCGATG TGTCGCCCGG CGAGATCATC
GGCATCGTTG GTCGGAGTGG TTGCGGCAAG TCTACAGTGT TCGCACTGCT ACAGCGTTTC
TACACCGAAT TTAGCGGCGA CATCACACTC GACGGAGCGC GCATCGAGAC GCTCTCGCCG
AACTGGCTCC GGCGTCACTG CTTCGCGCTC GTTGGCCAAG AGCCAGTACT TTTCAACGGC
ACAATTCTTT CTAACATTGC GTACGCTCGT TTGGGCGCCG GAATCGATCG GGAGCGTGCG
ATTGAGTGCG CTAAGACTGC GCTGATCCAC GACGTCATCG AAGACGAACT CGGCGGCTAC
GATACACACG TCGGAGAGCG GGGTTGTCAA TTGTCAGGCG GCCAAAAGCA GCGCGTCGCA
ATTGCTAGAG CGTTGTACTC GTCTCCGCGG GTGTTATTAT TGGACGAACC CACGAGCGCT
CTTGATTTAG AAGCCGAATC CATCGTTACC GCGGCTTTGC GAAAAGCCGC TCGCGGACGA
ACAACGATCG TCATATCACA CACGCCCGTC GACTCGTTCG TCGACAGAAC TTTAGAACTC
TCCCCTAGAA CATAG
 
Protein sequence
MPHFTSVAIG ASIDGDEARF RANVTRFLVV GVVNGVLDFS NVFLFALAQS RVARRLRNRA 
FAATLRKNMA YFDARTSGKI NSTVTNDTSA VSANLSWLLR SCVEAVVRCV GVGAYLLFWV
NFELGALALV VIPITSVVNY FYGKLLSANA ESVQETLAKS NGVAQETISN IVTVRSFANE
PFERRRFGDA IDEWYEQSYR AAQLSGWYYS FMYSLVSACF VPAAILYVGG GFVVDGSMHA
EKLVATMLYS AILQEYFGNL LSSFTNLFAA RGAAAELFKV LAKNEREDDD ADNGATLPID
DVKGAISFSN VSFSYPTRPD IPALSGVSFD VSPGEIIGIV GRSGCGKSTV FALLQRFYTE
FSGDITLDGA RIETLSPNWL RRHCFALVGQ EPVLFNGTIL SNIAYARLGA GIDRERAIEC
AKTALIHDVI EDELGGYDTH VGERGCQLSG GQKQRVAIAR ALYSSPRVLL LDEPTSALDL
EAESIVTAAL RKAARGRTTI VISHTPVDSF VDRTLELSPR T