| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_46264 |
|---|
| Symbol | CLPC2 |
|---|
| ID | 5002972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | - |
|---|
| Start bp | 388410 |
|---|
| End bp | 390947 |
|---|
| Gene Length | 2538 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 640418393 |
|---|
| Product | chaperone, Hsp100 family, ClpC-type |
|---|
| Protein accession | XP_001418921 |
|---|
| Protein GI | 145348985 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.335284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGATGCGCCG CGCTCGACGC GCGCACGGCG CGCCGATCGC GCGGTGGGTC GTTCTTCGAC
GCCCTGCGCG AGTCTCGCGC GAAAACGAGC GCGCGTGGCG TCGCGAAGGC GTCGAGACCG
CGAAAAGTGA CGCGGTGTGG ATTCTTTGAA ACATTCGACG GCGACGCCGT CGTCGCCGTC
AAGGACGCGA TGGACCTCGC GAAGAAATTT CGAAGCGCTG AATGCGGTTC TGAACACGTC
CTGCTCGCGC TGACGCGGAA TCGCGATCGG ACGAGCAAGG CATTGCACAA GCACGGGGTG
ACGGAGGAGG CGACGCGACG CGCGCTCGGC GAACGCGCGG GGGTGAGCGA ACTGGAACTG
ATGAATCCGT TTAATAAACC GAGCGCCGAG GGGTTGCTGG CGCTTAGCGA TGAGCTGAAA
AAGGTTTTTG AACGCGCGAG TGCGAGTGGG AGCGAGGTTG GGAGCAAGGA GCTCGCGCTC
GCGATGATTG ACGAACCGGC GAGCGGGGCG CGCGCGACGA TGGCGGCGCT GGAGGGGTGC
GATTTGAAGG TGCTCAGGAA GGAGATCACT GGAGCGAATG AGCGAGAACT CGTGGGGGCG
GGTAAGAAGA CGCGGAACAC GAAGAAGCAG ACGTTGGCGG ATTGCTCTAT CGATTTGACG
GCGGAGGCGC GCGAGGGTAA ATTAGATCCA GTGCTCGGCC GGGACGAAGA GGTGACGCGA
GTGATGCGGA TTTTGGTGCG ACGACGCAAG TCGAATCCGT GTTTGGTGGG CGAACCCGGG
GTTGGGAAGA CGGCCATCGC CGAAGGTTTA GCGATGATGA TCGCTAAAGG CGACGTTCCC
GAGAGCTTGA AGGAAAAACG CGTCGTGAGC TTGCAAATTG GTCTCTTGCT CGCCGACACG
AAATACCGCG GCGAGTTCGA GGAAAAGATG AAGAATGTCA TGGAGGAGGT TAAACAAGCG
GGAGATATTA TTTTATTCGT CGATGAGATT CACATGCTCG TTGGCGCCGG TGGTACCGGA
GAAGATGGTG GTATGGATGC CGGTAACTTG ATGAAGCCCG CGCTCGCAAG AGGCGAGTTG
CAGTGCATCG GGGCGACGAC GATTGACGAG TACAGGAAAC ACATCGAAAA GGATGCGGCT
TTGGAACGTA GATTCCAACC CGTGCGCGTC ATCGAACCCA GTCCAGAGCA AACGCTCACA
ATTTTGCGCG GTTTGAAGGA CACTTACCAA GAGCACCACG GCGTGTCCTT CACCGACGAG
GCGTTGCGCG CCGCCGTCTC GCTCTCCACG CGATACATCA ACGACAGATT CTTACCAGAC
AAAGCTATCG ATGTCATCGA TGAAGCCGGC GCTTTGGTGC AACTCACGCC CGGTGATAGT
ACGTTGGTTG ACGAGAGTCA CATCACCGAA GTCGTGGCGC AGTGGACGGG CGTGCCCGTG
CAACAGTTGA GCGCAGATGA GTCGCTTTCG TTGATGAACT TTGAACAAGA GCTCGGCAAG
CGCGTCATCG GCCAAGTCGA AGCCGTGCGT TCGATCTCAC AAGCCATTCG CCGCGCGCGG
GCTGGGCTGG CAGATGCGTC GAAACCGGTG GCGAGCATTA TATTTAGTGG TCCCACGGGC
GTTGGTAAGA CTGAACTCGC CAAGGCGGTG GCTCAGACAT ACTTCGGCGC CGAAAAGGCG
ATGGTGCGCA TAGACATGAG CGAATACATG GAATCGCATT CGGTGAGTAG ATTGATCGGT
CCGCCGCCTG GATACATTGG ATTTGGTGAG GGTGGACAGC TCACGGAGGC TGTGCGCACG
AACCCGCACT CGCTCGTGTT GTTGGACGAA ATTGAAAAGG CGCACCCAGA CGTCTTTAAC
ATTTTGCTCC AAGTCTTGGA AGACGGTCGC TTGACCGATA GCAAAGGTAG AACGGTGGAT
TTCACGAACG CCATGCTCGT CATGACAAGT AACATTGGCA GTCGTGAGAT CTTAGAATCC
ATGAGCGGCG AAGGCGAAGA TGAGGAAAAG TACAAAAAAC TTCAAACGCA AGTCAAGCGA
GAGTTGGGCA AGGAGTACCG TCCTGAGTTT TTGAACCGCC TCGATGAAAT TATCATCTTC
AGACCGCTGG AACGACCCGA GGTCAGCGCC ATCGCGGATC TCATGCTCGC ATCGGTTTCC
AAGCGTGCGC TCGCTCGTGG GATCACGCTC GATTTCACCG ATTCATTCAA ATCACTTTTA
TACTCCAATG GTTTTTCGCC TCGCTTTGGC GCCCGACCAA TGCGTCGATG CGTGCGAGGT
TTATTGGAGA ACAATCTCGC CGAATGCATG CTCGACGGAT TTGCATCTTC GGGCGACACC
GTGAACTTTG ATTACGACGA CGACCAGGAG CTGATTTCCG TGACGACAGC CAATGAAACT
ATGGCGCGCA CGTTTGACGT CGAATTCGGC TCTGGCATCG AAGACGTCGC CGAAGACACC
TCGGCGGACG ATTTCCCAGC CCCATTCTTC TCGAACGAAG GTGGCGGTGA AACCACCGCT
CAAGCCTTCG CTTAGTCG
|
|---|
| Protein sequence | MDLAKKFRSA ECGSEHVLLA LTRNRDRTSK ALHKHGVTEE ATRRALGERA GVSELELMNP
FNKPSAEGLL ALSDELKKVF ERASASGSEV GSKELALAMI DEPASGARAT MAALEGCDLK
VLRKEITGAN ERELVGAGKK TRNTKKQTLA DCSIDLTAEA REGKLDPVLG RDEEVTRVMR
ILVRRRKSNP CLVGEPGVGK TAIAEGLAMM IAKGDVPESL KEKRVVSLQI GLLLADTKYR
GEFEEKMKNV MEEVKQAGDI ILFVDEIHML VGAGGTGEDG GMDAGNLMKP ALARGELQCI
GATTIDEYRK HIEKDAALER RFQPVRVIEP SPEQTLTILR GLKDTYQEHH GVSFTDEALR
AAVSLSTRYI NDRFLPDKAI DVIDEAGALV QLTPGDSTLV DESHITEVVA QWTGVPVQQL
SADESLSLMN FEQELGKRVI GQVEAVRSIS QAIRRARAGL ADASKPVASI IFSGPTGVGK
TELAKAVAQT YFGAEKAMVR IDMSEYMESH SVSRLIGPPP GYIGFGEGGQ LTEAVRTNPH
SLVLLDEIEK AHPDVFNILL QVLEDGRLTD SKGRTVDFTN AMLVMTSNIG SREILESMSG
EGEDEEKYKK LQTQVKRELG KEYRPEFLNR LDEIIIFRPL ERPEVSAIAD LMLASVSKRA
LARGITLDFT DSFKSLLYSN GFSPRFGARP MRRCVRGLLE NNLAECMLDG FASSGDTVNF
DYDDDQELIS VTTANETMAR TFDVEFGSGI EDVAEDTSAD DFPAPFFSNE GGGETTAQAF
A
|
|---|
| |