| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_35780 |
|---|
| Symbol | |
|---|
| ID | 5002900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | - |
|---|
| Start bp | 523674 |
|---|
| End bp | 524975 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640418321 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418959 |
|---|
| Protein GI | 145349062 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.653202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACG TGTTGTCCAT CATTCTCGGC GGCGGCGCGG GGACGCGATT GTACCCGTTG
ACGAAGAAGC GGGCGAAGCC GGCGGTGCCG TTGGGGGCGA ACTACCGCTT GATCGATATC
CCGGTGTCGA ACTGTATCAA CTCTGACATC AACAAGGTGT ACTGCTTGAC GCAGTTTAAC
AGCGCATCTT TGAACAGACA CTTGTCCCAG GCGTACAACA CGAACATCGG GACGTACACG
CGTCAGGGAT TCGTCGAAGT GCTCGCGGCT CAACAGAGCC CGATCAACAA GGCGTGGTTC
CAAGGTACCG CGGATGCTGT TCGTCAATAC TTGTGGTTGT TTGCCGAGAG CGGGTGCGAG
GAATACTTGA TTCTTTCGGG CGATCACTTG TACCGCATGG ATTACCGTCC GTTTATTCGC
GACCACCGCG CGAAGAACGC CGACATCACC GTCGCCGCTT TGCCGACGGA TGAGAAGCGA
GCCAGCTCTT TCGGCTTGAT GAAGATTAAC GAACACGCCA CCATCATCGA GTTCTCCGAA
AAGCCCAAGG GTGACGCTCT CAAGGCGATG CAATGCGACA CCACCATCTT AGGCTTGGAC
GCGGAACGCG CCAAGGAAAT GCCGTACATT GCCTCGATGG GTATCTACGT GTTCAACGCC
AAGGCTATGG AGCAGGTGCT TCAAGATGAT TTCCCGGAAG CGAACGATTT CGGTGGTGAA
ATCATCCCGA TGGCGGCTCA GAAGGGCATG AAGGTGGTCG CTCACTTGTA CGACGGATAC
TGGGAGGACA TCGGTACCGT CGATGCGTTT TTCCACGCCA ACTTGGAGTG CAACGACCCG
AACCCGAAGT TCAGTTTCTA CGATCGCAAC GCGCCGATCT ACACCCAGTC TCGCTTCTTG
CCGCCGAGCA AGGTGCAAGA TTGCGAAATC GAGCGCTCCA CGATCGGCGA CGGCTGCACC
ATCAAGCAAG CCAAGCTCAA AAACGTCATG GTTGGTTTGA GATCGACGGT CAACGAAGGG
TGTGATTTGG AGGACACACT CGTCATGGGT GCTGATTACT ACGAGAGCCT CGAAGAATGC
GACCCGGCTA GCCTTCCGGG CTGCACGCCG ATCGGTATTG GCGCCGGCAC GAAGATTCGC
AAAGCCATCA TCGACAAGAA CGCGCGCATT GGTGAAAACT GCCAAATCCT CAATGAGGCT
GGCGTCATGG ATAAGGATTG CGAAAGCGAA GGTTACATCA TCCGCGATGG CATCATTGTC
GTCATCAAGG ATGCCGTGAT CAAGGCTGGC ACTGTCATCT GA
|
|---|
| Protein sequence | MDNVLSIILG GGAGTRLYPL TKKRAKPAVP LGANYRLIDI PVSNCINSDI NKVYCLTQFN
SASLNRHLSQ AYNTNIGTYT RQGFVEVLAA QQSPINKAWF QGTADAVRQY LWLFAESGCE
EYLILSGDHL YRMDYRPFIR DHRAKNADIT VAALPTDEKR ASSFGLMKIN EHATIIEFSE
KPKGDALKAM QCDTTILGLD AERAKEMPYI ASMGIYVFNA KAMEQVLQDD FPEANDFGGE
IIPMAAQKGM KVVAHLYDGY WEDIGTVDAF FHANLECNDP NPKFSFYDRN APIYTQSRFL
PPSKVQDCEI ERSTIGDGCT IKQAKLKNVM VGLRSTVNEG CDLEDTLVMG ADYYESLEEC
DPASLPGCTP IGIGAGTKIR KAIIDKNARI GENCQILNEA GVMDKDCESE GYIIRDGIIV
VIKDAVIKAG TVI
|
|---|
| |