| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_35308 |
|---|
| Symbol | |
|---|
| ID | 5002745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | + |
|---|
| Start bp | 21013 |
|---|
| End bp | 24957 |
|---|
| Gene Length | 3945 bp |
|---|
| Protein Length | 1268 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 640418166 |
|---|
| Product | ABC(ABCG) family transporter: pleiotropic drug |
|---|
| Protein accession | XP_001418585 |
|---|
| Protein GI | 145348289 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGC TCGTCGCGCG CGCGGAGAAC GCGGGAGATA AGAAGACGAC GCTCGAGGTG
CTGCGAGACG CGCGCGGGTG CTTTCGGCCG GGGACGCTGA CGCTCGTGCT GGCGCCGCCG
GGACACGGGA AATCGACGCT GTTGAAATCG ATCGCGGGAG TGAACCCGCT GCCGATCGAG
GGCGAGATCA CGTACAGCGG GCTGACGAAG AACGAGCTCG AGGCGAAAGG GGTGTCACTG
CATAGGTTGT GCGAATACGT CACGCAGCTC GACGAGCACC TGCCGTACTT GACGGTGAAG
GAGACGGTGC AATTTTCTCA TGAAAACGCG TGCCACGTGC CGAGTGATGC GGAAGGGAAG
GCTGCTTACG ACGATAAAGT GGACAAGGTG ATCAATCTAT TAAATTTGGA CGGATGCAAG
GACACGATAA TTGGTAACGA TCTCATCAGA GGCGTGTCTG GCGGGGAGAA GAAGCGCGTC
ACCATCGCCG AAGCGATGGT GAAAAATGCG CAAGTTTTGT GCATGGATGA GATCTCTACC
GGTCTCGATG CGGCGGTGAC GTACAACATT GTAGCTGGTT TGAAGGAATG GGCGTCTCGA
ACGCAAGGTA CGGGCATCAT TGCTCTCCTC CAACCCACTC CCGAGGTTGT CTCGCTGTTC
GACGACGTTC TCCTTCTCAA GGAAGGTGCA ACGGTGTATC ACGGTCCTGT GGATAACGTC
GCTACCTACT TCAAAGGCTT GGGATTCGCC CCACCCGCTG TCAACTCTGG CGCCGATCTC
GCCGATTGGT TGATCTCTTT GCTCGTTTCA CCCACGGAAA CGCTGTTGCG CGCCGGAACG
CAACCGTCCG ACGCGATTCC CACAAACGTT GACGCCATGG TGAAGTCGTG GCAATCCACG
CAAGCGTACG AGTCGAGCAT TAAATCGAAG TGTACACCAG CCGACATCGA ACTGAATACG
CCGTTTGCCA AGAATCAGTA TTCTCTCAGT TACCCTCGCT CATTCGCCGA TCACTTCAAG
TCTGTGTTCA AGCGACAGGC CCAAGTGACG CTGCGGAACA AGCTCTTCTT GCAAGCGCGC
ATCTTCGGTG CGTGCGTAAC GTCACTCATC CTAGGTTCGG TATGGTTTGA CTTACCGCTC
GAACGTGGGT TCGAAAAGCT TGGTATGCTG CTCTTCTGCA TCTTGCACAT CTCCTTCTCA
AACTTTTCTG AACTGACGTT CAGCGTCGAG CAAAAGTACG TCGCATTCAA GCACTTGGAC
GCGAAACTTT TCCCCGAGCT ATCTTATCTC GCGTCATGGG CCCTGGTGCA TCTTCCGATT
GCTATCGTGG AGACTCTCAT CTTCAGCTGC GTGCTGTATC CAATGGTTGG CTTGAACTTA
GCTTTCAAAC AATGGGGCTT TTTCTACTTG CAGTTGGTGC TCGCAAACGT CGCGATGGCG
TCCTTCTTCC GCGTCATTGC GTTGGTATCT CCGACGATGG AAGTCGCACA AATCTACCCG
GGTCCATTCA TCGCAGTTAT GATCCTCTTC GCTGGTTTCT TGATCAGCCC GGAGCTTATG
GGAGGTTTGG AGTTCATGTA CTGGGTTTCG ATTTTCGCCT ACTGCTTGCG TTCGCTATGT
CAGAATGAGT TCCTGTCGGG TCACTACAAC GTTTTAGTTC CGAACGACCC GATCACGGCA
GCAACGTTCG TGGCCAATAA TCCGCAGTAC AGCTCAACCT CGATGGAGAG CCTTTGTCGG
CAAAATTTGA TCACGCCGTG CTCAAACATG GGAGAAATCA TTCTGGACAC GATTGGCATC
ACCAAAGATA CCTCTTACAA ATGGGCCGGT CCGGCGTTTT GTCTCGGATT TTTTGCTCTC
ACCTTTGCCG TTGGATTGCG CACACTGCAC ACAACCCGCA TTCAACGTAA TATCGGGTCC
AGTCGCGCCG AAGATAAAGC TCAAAACGAT GAAGAAGTTA TTCAAATGAT CGACGTCGCG
GCCGCCCAAA AGGCGATGGA TTTTACCGCC ATGGCCATAT CGTGGAAAGA TCTGTGCTAC
ACCGTTGAAG TGGCAGCGGC GACCCCCAAA AGTGGCGCCA TGGATGACAG CACAACAGAC
AAAAAAGAGA AAACCGTGTC AAAACAACTG TTACACAATA TTTCATCCGC TGCACAACCG
GGTCGCATGC TCGCTCTCAT GGGGAGCTCA GGCGCGGGCA AGACAACCCT GCTCGACGTC
ATCGCTGGTC GCAAAAACAC AGGGCTTATC TCTGGAGATA TCAAGTTGAA CGGACATAAT
GTGAAAAAAG AAACATTTGC CCGCTTGACT GCGTACTGCG AGCAAATGGA TTTGCACAAC
GAGTTCACTA CGGTGCGCGA AGCGCTTGAA TTCAGCGCCA AGCTTCGCTT GCATCCGTCC
ATCTCCGATG AAACTCGCGT TGCGTTCGTC GATGAAGCGC TGGAGATTTT AGAGCTTAAC
TCCATCGCCC ACAGAATGAT CGGCACGTCT GGAAGTGACA CCGGGTTGGC CCCAGGACAG
CGCAAAGTGC TCACGGTGGC GGTTGAGCTG GTGTCAAACG CTCCCGTCTT CTTTTTGGAC
GAACCTACAT CCGGACTGGA CGCTCGCAGC GCGTTGATCG TCATGAAGGA AGTTAAGAAG
GTGGCTGCGT TAGGGCGTAC GGTTATCAGT ACCATCCACC AACCCTCGAT GGAGATATTC
TTGATGTTCG ATGACATGCT TCTTCTCCAG CGGGGCGGCT ATCAAGTATA CTTCGGCGAA
CTCGGGAAGG GAGGCTCGAC CATGGTGAAT TACTTGCAAT CGCTGAAAAT GGCTCTTCCG
CTTCCATCGG GTATGAATCC GGCGAGCTGG ATGCTCGACG TTCTCGGTGG CAGCGACTCG
AGCGGCGGAG CCTCGAGGAA GAAAGGTAGC ATGAAGCGCA GTGCCAGTGG CATCGCCCTC
GACGGCTTGC TGCTTGATCA AAAATTCATG TCTAGCGCCG AGGGTCAGGC TGCGATGAAG
TTGGTGAACG CCATTAGTGA GCAAGGAGCG GATGAAAAAA TGTTTAGTTT CGATTCTCCG
TACGCTAGAA CGTTCAAAAC GCAACTTTTG GCGATCCTTT CGCGTGCGAA CAAGTCGCAA
TTGCGCGATG TCGGCTACAA CTGCGGACGC ATCAGTATCC TCACAATCTT GTACATTCTC
TTTGGCGTCA TTTACCTCGA CTTGAAGATT ACAGATGAAG CTGGAGTGCA ATCTATGGTA
GCGTGCGTGT TCATGACGAC GATTTTCACT GGTATTATTT GCATGAACAG CGTCATGCCA
GTGCGAGTTC GGGAGCGAGC GGTGGCATTC CGCGAGCGCA GCTCGTACAT GTACGACGCT
ATTCCATTCT CTTTGGCGAC GGCTATCATT GAAGTCCCTT GGATCGCAAT CATCAGCTTA
GTCACCGTGA TTCCGATGTA TTTCCTCGTC GGTATGATTC CAACCGCACA GCGTCTCTTT
TTCCATATCC TCGTCAACTT CTTGGTATCG TTCACGTTTT TGAGTTTTGG TCAAGCCATC
GCGTGCATGT GCTCCACCAT TGAAACTGCG CAGGCGGGCA CTTCGGCGTT CATTCCCATC
GCGTTCTTAT TCGGTGGTTT GTACTTGCCC CTTCCGCAGA TTCCAGTCTA CTGGCAGTGG
GCTTATTACA TCAATCCTGT GGCGTACGCC ATTCAATCCG TCGTCGCGCC GCAGTTCGAG
CGACGCGGGT GCTCTGGCCC ATACCCCAGC GGCAACTGCC CGACGATTCA AGCGTTCCGA
GGCTCTTACT TTGAAACCAT CGACACTTTA ACGTACGTCG AACAAAAGTA TGAGATCAAG
TTCTCAGAAC GCTGGATCTC GTGCGGCTAC CTCTCCATCT TCGCCTTCGG CATGCAGTTC
GTCCACTCCC TCTTTTTCAA GACGAGCAAC GTCGTGAAGC GATGA
|
|---|
| Protein sequence | MKSLVARAEN AGDKKTTLEV LRDARGCFRP GTLTLVLAPP GHGKSTLLKS IAGVNPLPIE
GEITYSGLTK NELEAKGVSL HRLCEYVTQL DEHLPYLTVK ETVQFSHENA CHVPSDAEGK
AAYDDKVDKV INLLNLDGCK DTIIGNDLIR GVSGGEKKRV TIAEAMVKNA QVLCMDEIST
GLDAAVTYNI VAGLKEWASR TQGTGIIALL QPTPEVVSLF DDVLLLKEGA TVYHGPVDNV
ATYFKGLGFA PPAVNSGADL ADWLISLLVS PTETLLRAGT QPSDAIPTNV DAMVKSWQST
QAYESSIKSK CTPADIELNT PFAKNQYSLS YPRSFADHFK SVFKRQAQVT LRNKLFLQAR
IFGACVTSLI LGSVWFDLPL ERGFEKLGML LFCILHISFS NFSELTFSVE QKYVAFKHLD
AKLFPELSYL ASWALVHLPI AIVETLIFSC VLYPMVGLNL AFKQWGFFYL QLVLANVAMA
SFFRVIALVS PTMEVAQIYP GPFIAVMILF AGFLISPELM GGLEFMYWVS IFAYCLRSLC
QNEFLSGHYN SLCRQNLITP CSNMGEIILD TIGITKDTSY KWAGPAFCLG FFALTFAVGL
RTLHTTRIQR NIGSSRAEDK AQNDEEVIQM IDVAAAQKAM DFTAMAISWK DLCYTVEKTV
SKQLLHNISS AAQPGRMLAL MGSSGAGKTT LLDVIAGRKN TGLISGDIKL NGHNVKKETF
ARLTAYCEQM DLHNEFTTVR EALEFSAKLR LHPSISDETR VAFVDEALEI LELNSIAHRM
IGTSGSDTGL APGQRKVLTV AVELVSNAPV FFLDEPTSGL DARSALIVMK EVKKVAALGR
TVISTIHQPS MEIFLMFDDM LLLQRGGYQV YFGELGKGGS TMVNYLQSLK MALPLPSGMN
PASWMLDVLG GSDSSGGASR KKGSMKRSAS GIALDGLLLD QKFMSSAEGQ AAMKLVNAIS
EQGADEKMFS FDSPYARTFK TQLLAILSRA NKSQLRDVGY NCGRISILTI LYILFGVIYL
DLKITDEAGV QSMVACVFMT TIFTGIICMN SVMPVRVRER AVAFRERSSY MYDAIPFSLA
TAIIEVPWIA IISLVTVIPM YFLVGMIPTA QRLFFHILVN FLVSFTFLSF GQAIACMCST
IETAQAGTSA FIPIAFLFGG LYLPLPQIPV YWQWAYYINP VAYAIQSVVA PQFERRGCSG
PYPSGNCPTI QAFRGSYFET IDTLTYVEQK YEIKFSERWI SCGYLSIFAF GMQFVHSLFF
KTSNVVKR
|
|---|
| |