Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_32753 |
Symbol | |
ID | 5002885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | + |
Start bp | 578542 |
End bp | 580224 |
Gene Length | 1683 bp |
Protein Length | 482 aa |
Translation table | |
GC content | 59% |
IMG OID | 640418306 |
Product | predicted protein |
Protein accession | XP_001418749 |
Protein GI | 145348630 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0706141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.06368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CGGAGCGCGG GGGGGCGATT CGACGCGAAG AGCGCGAACG CGACGGATTC GGAGACGACG ACGACGGCGG CGACGCGAGA GACGGTCGCG GAGGACGGTG ATGGGGCGAA TGAGGCGGTG CGGAGAGTGG CGGAGGATCA CGTGCGGGCG ATGGAGGCGC TGAAAGATGG TGGGGTGGGC GGGCGCGGGA CGAGGAAGTC GAGGGAGGCG GCGTCGACGA GACGGGATTT TCGAGCGCGG GACGCGAGGT GCGTCGTGCT CGCGGGGGGG GCGGACGAGA CGAATCCGTT GACGCGTGGG CGCGCGCGAA GTGCGGTGCA TCTGGGGGGG GCGTATCGAG TGATTGATTT TCCTTTGACG AATTTAATCA ACTCGGGCAT GCGTCAGGTG TACGTGCTGA CGCAATACAA CAGTCACTCG CTGGTGACGC ACGTCAACCG CGCGTTCCCG ATGGAGATGT TTGGAAACAA CAACGAAGGG TTCGTAGAGG TGTTGCCGAC GTCGCAGACG CGCGAGCACG GGGAGACGTG GTCGATGGGG AGCGCGGATT GCGTCGCGAG GCACCTCACG CACGGTTCGC TCACCAAGCA TAGTTTCGAC ATGCGCTTGG AGGACGAGTG TTTGCAAAGA CACGGATCGC TCGAAGCGTG CGCGGCGAAC CAAACCGACG GGATCACCAT CGTGTTGGCC GCCGAGCAGT TGTACACGAT GGACTTCAAC AAGCTCTTGG AGGCGCACTT GAAGTCGGAA GCAGACGTCA CCGTCGCGAC GTGCGATCAA GTCACGGCGG AGAACGCATC GAGATTGGGC ATCATGGACG TCGACGAGCA CACGTCGAGC ATTTTATCCT TCATCGAGAA GCCTTCGGCC GATCAGTTGC TCGAGTTTAT GCAGTGCTCG ACGGAGAATG AGCTTCTCGA GTGCAAGCTC AACGCCAACA TGGGCGTGTA CGTCTTCAAC AACTCAGCCC TGGAAGAGCT TTTGAGAGAT TCAAAGAATC CGGCGGAAGA ACGACACGAA TTCGGCAGGG ACATCATTCC GCACGCGGTG AACGCGGGCT ACGACGTACG TTCGTACAAG CACTCTGGTT ATTGGAAGCC GCTTCGAACG CTCGCCGACA TTTATGAGGC GAACATCTCA GTCGCCACCG GCGGCGACGC CGCGTCACTG ATCGACTTTG ATCGATTAGT GTACACGAAA CCCAACTTTT TGCCGCCTAA CACATTTTAC GGATCTTCGT TGACCGAGCG TTCAATCATT TCGGACGGGT GCGTCATTCG CGACGGCGCC AAAATCATCA ACTCCATCGT CGGTCCGTGC ACTGTGATCG ACAAAAACGT CGATTTGGAA GGAGTCGTCG TGGTCGGTCG CGACGAAATC CTGAAGCGGT CCGGAGGGGA CAAAGTCGCC GATATCGGCG CGAATACCAT CATTCGTAAG TGCATGGTTG ATTCCGACGC CGTCATCGGA GCCAACGTTC GCATTCTCAA CGAGGCAGGC ATTCAAGAAC TCGATCGCAC CGAGGATGGA TACATCATCA GTGAAGGCAT CGTCACCATC CTCGGAGGCG CCGTGATCCC CGATGGGTTC ACAATCTAAA CAATAAACAG AACACAGCGC CGGGCTCAAG CCATTTTGAA CCCGCCGCGA GCGAAATGAA AATAGGGACG CAGGCGGAAA CCG
|
Protein sequence | MEALKDGGVG GRGTRKSREA ASTRRDFRAR DARCVVLAGG ADETNPLTRG RARSAVHLGG AYRVIDFPLT NLINSGMRQV YVLTQYNSHS LVTHVNRAFP MEMFGNNNEG FVEVLPTSQT REHGETWSMG SADCVARHLT HGSLTKHSFD MRLEDECLQR HGSLEACAAN QTDGITIVLA AEQLYTMDFN KLLEAHLKSE ADVTVATCDQ VTAENASRLG IMDVDEHTSS ILSFIEKPSA DQLLEFMQCS TENELLECKL NANMGVYVFN NSALEELLRD SKNPAEERHE FGRDIIPHAV NAGYDVRSYK HSGYWKPLRT LADIYEANIS VATGGDAASL IDFDRLVYTK PNFLPPNTFY GSSLTERSII SDGCVIRDGA KIINSIVGPC TVIDKNVDLE GVVVVGRDEI LKRSGGDKVA DIGANTIIRK CMVDSDAVIG ANVRILNEAG IQELDRTEDG YIISEGIVTI LGGAVIPDGF TI
|
| |