Gene OSTLU_32540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_32540 
Symbol 
ID5002959 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp216221 
End bp217345 
Gene Length1125 bp 
Protein Length217 aa 
Translation table 
GC content63% 
IMG OID640418380 
ProductF-ATPase family transporter: protons (chloroplast) 
Protein accessionXP_001418641 
Protein GI145348409 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.17293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGTCATGT TTACGATCTC CGCGTCCTCC ACCGCCGCGC GACCGACCGT GGTCGCGCAC 
CGTCGCGCGA ATAAGACGCG CGCGAAGCGT TCCGTCGTCG TGCACGGCGC CAAGGTGCGC
GAACGCGCGA GCGCGCGACG CGCGCGCGCG ACGCGAACGC GCGCGCGAGT AATCGCGAGG
GGCGCGATCG GGCGTGTTAT CCTCGACGAC GACGGCGTCG GACGAGGCGC GAACGCGATG
AAGAGGACCG CGAACGCGCG TGGGAGTTTT GTTGCGTCGC GCGCGCGCGT CGCGGCGCGC
GCGCGGGCGT CGACGGGGGG ACGGCGGACG GGACGAGGCG ACGGCGATCG CGCGGGGCGT
ATCCTCGAGG GGTTTGGCGC GCGCGCGCGC GGCGCGGACG AATCCGACGT TTGACGCGGT
GTGGGTGGAC GTGCGTTTGA CGAGAACGGT AGACTGACGG ATGATTGATC GTTTTCGCGC
GTTGCAGTCC AACCCGGTGT CCAGCGGTTA CGCCGCGGCG CTCGTCGACG CGTGCAAGTC
CTCCGGCGCG CTCGAACAAG TGCACGCCGA TATGGAGACG CTCGACGCGT ACGTCAAGGC
GAACGCCAGC GTTGCGGGCT TCTTGGCCAA CCCGACCATC GTCGCGGAAA AGAAGAAGGA
TGTTTTGGCG AAGCTCGGCA AGGAGGCTGG CTTCCACGCG TTCACGGGCA ACTTCTTGAA
CTTGTTGGTG GACAAGAGAC GTGAAAACCA AATCGAGGCC ATCATCGCCG AGTTTGAAAC
TTTGTTCTGC GAGGCGACGG ACACGCAAGT CGCGACGGTG ACTTCCGCGG TCAAGCTCGA
AAACGAGCAA CAATTCATGA TTGCGAAGAA GTTGCAAGAG ATGACGGGCG CCAAGAACAT
CAAGCTCAAG CCGGAAGTCG ACGAGTCTCT CCTCGGCGGC TTCGTCGTGC AATACGGCAA
GGATGGCTCC GGCTTCATCG ACATGTCCGT CAGAGGACAA GTGGATAAGC TCGCCAGTGT
GTTCGTGAAC TAAGCGAATA CGTCGTCGAT TTGCCGCATA GCCGAAAGTA GAACCGCCGG
ACAAGTTCCG CCGCTGATTT AATTTCAATT CAATTGAGTC ACCTC
 
Protein sequence
MFTISASSTA ARPTVVAHRR ANKTRAKRSV VVHGAKSNPV SSGYAAALVD ACKSSGALEQ 
VHADMETLDA YVKANASVAG FLANPTIVAE KKKDVLAKLG KEAGFHAFTG NFLNLLVDKR
RENQIEAIIA EFETLFCEAT DTQVATVTSA VKLENEQQFM IAKKLQEMTG AKNIKLKPEV
DESLLGGFVV QYGKDGSGFI DMSVRGQVDK LASVFVN