| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_32481 |
|---|
| Symbol | |
|---|
| ID | 5002672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | - |
|---|
| Start bp | 129269 |
|---|
| End bp | 130851 |
|---|
| Gene Length | 1583 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640418093 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418845 |
|---|
| Protein GI | 145348827 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0640896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0098144 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGC TGCGCAAGCG CGCGAAGACG CCGCTCGCGA CGACGGCGTC GCGGAGCAGG
GCACACGAGG TGCGCGCGCC GACGCGCGCG ACGACGAGGC GCGCGCGCGC GACGCGGCGC
GGCGTCGATG GAGAATGCCG TTGGGACGCG CTGCCGCGAT GCGCGACCGC GCGCGGACGC
GACGAGAGGA CTGACGGACG GACGCGCGCG CGCAGGATGA TCAACCGCCG TCGCCGTCCT
CGCCGCGCGC GCCGAAGCGG CGGGTGTCGA TCGATCACGC CAAGCGCGTG ATCGAGCAGG
GGCGGGCGCG ATGGCGAAGC CTGCGGCAGC GCACGCAGTC GACGCTGCTC ATGCTCGCGG
CCGCGTCGAG CATCATCGTC GGAGGACACG CGTACGCGAT GATGCTGTGC TTTGCGGTGC
AGTTCGCGAT GGCGAAGGAG TTGTTTGCGT TCGTGTCGAA CGCGCACGCG GAGGAGAACG
CGCCGGGGGA AGATACGGCG GCGTTGCGAA GGACGACGAC GACGCTGCGG TGGTACTGGT
TTTGGACGCT GTCGTTCGCG GTGTACGGAA GATTCGCAAA GTACTTATAT CTTGGGTTCA
TGAGCGCGAA GGAGTGGAAC GAGTTGTTAC AAAACGGGGC CGAAGTGAGC CCCGGAGCTT
GGTTGGCGAT GCACCACACG TTTTTGAGCT ATTGCGCCTA TCTCGTGGGA TTGGTGTATT
TCGTGCTCAC GCTGAGGAAA GGGCGATACG CGTATCAGTT CGCACAGTTC GCTTGGACGC
ACATGATCGT CGCGGCGACG ACGATGACGG GATACTTCAA CGTTTCCAAT CTTTTAGAGG
GTATGATATG GTTCGTGTTT CCACTCTTTC TCGTCATCGT CAACGACATC ATGGCGTACG
TGTTCGGGAA AATCTTCGGC AAGACGCCTT TGATTAAGAT TTCACCCAAC AAGACGTGGG
AAGGATTTTT GGGCGCGTTT GTTTCGACTC TCGTCGCTGC GCTGGCTATG GCGTCTTACT
TGCAGAAGTT TAGTTACTTT ACGTGTCCGC CGAGCGGCGA CATGTACTTT CGAGGTATCT
TTTCTCGGAG CGCCAAAATT TGTGCTCCCA ACGAGCCGTT CATCGTGTCC GATAAACCGA
TCACCATGTT TCTCGGCACC GTCGTCGGTC CTCTGGCGAC CAAGTTGACC GGCATCGCCA
CCGTACGTTG CTCGATGTTC ATGGTGCACT CGCTCGCGCT CGGCACCTTT GCGAGCGCCG
TCGCGCCGTT TGGCGGCTTT TTCGCCTCTG GGTTCAAGCG CGCGTTCAAG ATTAAAGACT
TCGCGGCAAC CATTCCCGGA CACGGCGGTA TCACCGATCG CATGGACTGC CAAGTCATCA
ATTCGTGCTT CTCCTCGCTC TACCTCTCCA ACTTTATCAC GCACGTCGGC GGCTCCTTGA
CGCTGGGCGC GCTCTTGACG AAAATAGAGC TCGCGAGCGA CGCGCACATC GTCGCACTGT
ACAACGCACT GACGAAAATG ATCGAGGCGC GAGGTCTTTC CGTCGGGATC GATCCATCGA
TCCAAACCAT TGTCCAAACG TAA
|
|---|
| Protein sequence | MVELRKRAKT PLATTASRSR AHEDDQPPSP SSPRAPKRRV SIDHAKRVIE QGRARWRSLR
QRTQSTLLML AAASSIIVGG HAYAMMLCFA VQFAMAKELF AFVSNAHAEE NAPGEDTAAL
RRTTTTLRWY WFWTLSFAVY GRFAKYLYLG FMSAKEWNEL LQNGAEVSPG AWLAMHHTFL
SYCAYLVGLV YFVLTLRKGR YAYQFAQFAW THMIVAATTM TGYFNVSNLL EGMIWFVFPL
FLVIVNDIMA YVFGKIFGKT PLIKISPNKT WEGFLGAFVS TLVAALAMAS YLQKFSYFTC
PPSGDMYFRG IFSRSAKICA PNEPFIVSDK PITMFLGTVV GPLATKLTGI ATVRCSMFMV
HSLALGTFAS AVAPFGGFFA SGFKRAFKIK DFAATIPGHG GITDRMDCQV INSCFSSLYL
SNFITHVGGS LTLGALLTKI ELASDAHIVA LYNALTKMIE ARGLSVGIDP SIQTIVQT
|
|---|
| |