Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_16249 |
Symbol | |
ID | 5002788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | + |
Start bp | 645126 |
End bp | 645785 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | |
GC content | 58% |
IMG OID | 640418209 |
Product | predicted protein |
Protein accession | XP_001418763 |
Protein GI | 145348660 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.030888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGCGCA CGTGTGATGC GGTGGCGTTC GATGTGGATA GCACGGTGTG CGAAGATGAG GGCATCGACG AGCTCGGGGC GTACGTCGGT GCGGGCGAAC GCGTAGAGGC CATCACAAAA AAGGCGATGG AGGGAGGGAT GCCTTTCGGT GAGGCTTTAC AAGCGAGATT AGAGGCCATG GCGATCACTC GGGAGCAGTT GGAGACGTAC GTGGCGAAAA ACCCGCCGAA ATATTCACCG GGGATCAAAG AACTCACTGC CGCGTTGCGC GCGAGCGGTA AAGAAGTATA CCTCGTCTCC GGTGGGTTCA GACAGATGAT CGCTCCCGTG GCGAAAGGTT TGGGTATTCC AGTCGAAAAT ATCTACGCCA ATACGATAAC GTTCAACGAG GACGGCTCGC TGAAAGGTTA CGACGCCGGC GAGTTCACCT CGCGTTCGGG TGGCAAAGCC GAGGCGGTCA AGCACATCAA ATCGAGTCGA GGGTACAACA CGATGGTCAT GGTCGGCGAC GGCGCCACCG ATCTTGAAGC GAAGATCCCC GGCGGTGCCG ACATCGTTGT CGGCTACGGC GGCGCCCAGC GTCGCGCCAA AGTTGAAGCC GAAGCCGACT GGTTCGTGCT CGATTTATTC GTCCTCGCGG AAGCTCTCAA AGGTGCGTGA
|
Protein sequence | MWRTCDAVAF DVDSTVCEDE GIDELGAYVG AGERVEAITK KAMEGGMPFG EALQARLEAM AITREQLETY VAKNPPKYSP GIKELTAALR ASGKEVYLVS GGFRQMIAPV AKGLGIPVEN IYANTITFNE DGSLKGYDAG EFTSRSGGKA EAVKHIKSSR GYNTMVMVGD GATDLEAKIP GGADIVVGYG GAQRRAKVEA EADWFVLDLF VLAEALKGA
|
| |