Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_16090 |
Symbol | |
ID | 5002633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | - |
Start bp | 285360 |
End bp | 286934 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | |
GC content | 52% |
IMG OID | 640418054 |
Product | predicted protein |
Protein accession | XP_001418891 |
Protein GI | 145348923 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00292057 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00726349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGTGA ACGGTAACGA GCTCATCAAG GATTGCGTGA TGGAGCTCAA CGTCGGACGG CGCTACGGTT TATTAGGCCC GAATGGGTGC GGCAAGTCCA TGCTTCTGGA AGCCATAGCG AAGCGCGAAC TAGAAGTACC CGCACACGTT GACATATATC ATCTGCGCGA AGAAGCTGAA CCGAGTGAGC GAAGCGCGCT CGAGGCTGTT GTGGACCATA TACGCGAAGA AGTTTCGCGC CTGCAAGCCA TCGAGAGCGA AATTCTCACG ACGAACGGGC CCGGCGACGA GCGCCTTCAG GGAATATACG AGCGTTTAGA GGAACTCGAT CCGGTTAAAT TTGAAACTAC GGCGGCGGAG CTTCTCCACA ATTTGGGATT CGATAAAGTC ATGATGAATC GCGAAACAAA GGCGCTGTCT GGTGGTTGGC GAATGCGCGT CTCTCTCGCG CGCGCTCTTT TGGCGTCGCC GGCGTTACTT TTACTCGACG AGCCGACGAA TCACTTAGAT TTGAGCGCGT GCGTGTGGCT CGAAGATCAT CTGTCAAAAT ATAAGAAGTG CCTGGTCGTG ATTTCGCACT CGCAAGACTT CCTCAACGGT GTGTGCTCGC ACGTCATCAG AGTCACAAAC AAGACTTTGA AGTACTACAC GGGCGACTTC GATACGTTTC GCGCCACGCT CGCGGCGGAA GAGGTTATTC AGCAGAAGCA GTACGAAAAA GAGCAAGCGG ATATCAAACA TCTGAAAGAA TTCATCGCGT CTTGCGGTAC CTACGCGGAT AAGATGAAAC AGGCGAACTC GAAACAAAAG ATTCTGGACA AGATGGAAGC CGCCGGGTTG ACGCCGTCGC CGACGGCGGA GAGAACTTTC GAATTCACGT TCCCAGATTG TGCCAAGCTC GCACCGCCAG TACTTCCGTT TAAGAACGTT TCCTTCCGAT ATCACACGGC GGATCCTTCG CTCGGTATGC TTTTAGAAAA CCTGGAGTTC GGAGTGGATT GCGATTCTCG AATCGCGCTC GTCGGCCCAA ACGGTGCGGG TAAGTCGACA ATTCTCAAGC TCATGACGGG TGATATCGAA GCGAGCGAAG GCGAAGTCGC GCGACACCAC CACCTCAGCA TCGGGCGGTA CCATCAGCAC AGCGTCGATG TGCTGGACCC GCGCGCGTCG CCTTTGGATT TCTTCTCTGG GACGTATTAT GACATGCGAA AACCGACGGA CGAGTGGCGG TCGTATTTGG GCAAGTTCGG CATCAGCGGG CGTTTACAAA CCAATCCCAT CGCCGCGCTT TCGGATGGAC AGAAATCACG TTTGGTATTC GCCATGATTT GTCTCGGTAA CCCAAACATG CTTCTTCTCG ACGAGCCGAC GAATCACTTG GATCACGATT GCATCGACTC TCTCGCAGAC GCCATCAACA AGTACAAAGG CGGTCTAGTA CTCGTTAGTC ACGACTTTAG ATTGATCGAT AAGGTGGCGA AAGAGATATG GGTGTGTGAA AACAAAAAGG TGTCCGTGTG GAAAGACTCC ATTCGTTCAT ATAAAAAAAC GTTAGAAAAG GCGTCGATTA AATAG
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Protein sequence | MSVNGNELIK DCVMELNVGR RYGLLGPNGC GKSMLLEAIA KRELEVPAHV DIYHLREEAE PSERSALEAV VDHIREEVSR LQAIESEILT TNGPGDERLQ GIYERLEELD PVKFETTAAE LLHNLGFDKV MMNRETKALS GGWRMRVSLA RALLASPALL LLDEPTNHLD LSACVWLEDH LSKYKKCLVV ISHSQDFLNG VCSHVIRVTN KTLKYYTGDF DTFRATLAAE EVIQQKQYEK EQADIKHLKE FIASCGTYAD KMKQANSKQK ILDKMEAAGL TPSPTAERTF EFTFPDCAKL APPVLPFKNV SFRYHTADPS LGMLLENLEF GVDCDSRIAL VGPNGAGKST ILKLMTGDIE ASEGEVARHH HLSIGRYHQH SVDVLDPRAS PLDFFSGTYY DMRKPTDEWR SYLGKFGISG RLQTNPIAAL SDGQKSRLVF AMICLGNPNM LLLDEPTNHL DHDCIDSLAD AINKYKGGLV LVSHDFRLID KVAKEIWVCE NKKVSVWKDS IRSYKKTLEK ASIK
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