| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_12699 |
|---|
| Symbol | |
|---|
| ID | 5002658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | - |
|---|
| Start bp | 191133 |
|---|
| End bp | 192146 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640418079 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418864 |
|---|
| Protein GI | 145348866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00642034 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCCG GGAGGTTCTT CCGCGACCAC ACGAGCGCGG TGAACGCGCT CGATTTCCAT
CACACCGAAG ATGCCCTCGT CACCACGGGC GACGACGACG CGATCCATCT CTACAACACC
AACACCGGCG CGAAGACGCG CACGCTGTAC AGTAAAAAGT ACGGGTGCAC GAACGTGTGC
TTCACGCACA GCGCGGCGGC GGTGATTTAC GGGTCGAGGA ACAAGGGCGC GGGCGGGGCG
GCGATCGACG ACCACGCGGT GAGGTATCAC TCGCTGCACG ATAACACGTA CCTGCGATAT
TTCAAGGGAC ACACCGATGC GGTGACGTCG ATCGCGATGA ACTCGACGAA CGATTGCTTT
TTGACCGGAA GCGCGGATCT CACGGTGCGA ATGTGGGACT TGCGGACGCC GAAGTGCTGC
GCGGTGATTC CAGAGTGTCC GGCGATTCCG TACGTGGCGA CGGACGCGCA GGGAGACGTG
TTCGCGGTGA CGGAAGGTGA CGGCGGGATT AAGCTGTACG GGACGAATAG TTACAGCCAA
GGCGCGTTCG CGCAGTTTGA GACGTACATC GATAACGCGG GCAAAGAGTT GTTCCCGAAC
CCAGACAACA ACCCGCAAAT GCGGCCGCCC GCGATTTCGT GCCTGAAGTT CTCTCCGGAC
GGCAAGCGTT TACTCGCCGT GAACGGGAGC TGGATCACGA TTTTCGATGC GTTCAACGGA
GAGCACACGA TGCGTATTCG CGTGCCGGGG TCGGGGCAGC AACAGCACGC TGTGACGCCG
ATGGAGGCGA GTTTTTCGCC CTGCGGCGAG TACGTCGTGA GCGGTGGCGC GGACTCGCGC
GTTCACGTGT GGAGCTGCAG CACCGGGTAC CAAACCGGCC ACTGGCGCTC GCGTCACGCC
GGTTTACCCA CGTGCGTGAA GTGGGCGCCG AGCATGATGC TCGTCGCGAG CGGTTGTTCC
GAGGGCGGCA CGGCGTTGTG GGTTCCGGAT CCGAACGTCG ACGAGCGCCG TTAG
|
|---|
| Protein sequence | MAPGRFFRDH TSAVNALDFH HTEDALVTTG DDDAIHLYNT NTGAKTRTLY SKKYGCTNVC
FTHSAAAVIY GSRNKGAGGA AIDDHAVRYH SLHDNTYLRY FKGHTDAVTS IAMNSTNDCF
LTGSADLTVR MWDLRTPKCC AVIPECPAIP YVATDAQGDV FAVTEGDGGI KLYGTNSYSQ
GAFAQFETYI DNAGKELFPN PDNNPQMRPP AISCLKFSPD GKRLLAVNGS WITIFDAFNG
EHTMRIRVPG SGQQQHAVTP MEASFSPCGE YVVSGGADSR VHVWSCSTGY QTGHWRSRHA
GLPTCVKWAP SMMLVASGCS EGGTALWVPD PNVDERR
|
|---|
| |