Gene OSTLU_12689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12689 
Symbol 
ID5002668 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp117827 
End bp118741 
Gene Length915 bp 
Protein Length203 aa 
Translation table 
GC content63% 
IMG OID640418089 
Productpredicted protein 
Protein accessionXP_001418839 
Protein GI145348815 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.166155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0578353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCG AGTACGATTA CCTGTTCAAG CTCCTGGTGC GTCGAACGAG TCGCCGCGAC 
GACCGACGCC TCGGCGCGCG CGCGCGCGAC GCGCGCGCGC GCGCGCGAAC GCGACGCGCG
CGCGAACGCG CCGCGTGCCG TTGAGACGGG CGATCGTCGC GACGCGAACG CTCGACCGCG
ACGCGCGGTG ACGCGAGGGA TCGAGGGACG GGCGCGCGCG GACGCGAGCG AAGGCGACGC
GGACGAGGAC GGGATCGACG CGCGGGCGCG GGAGGCGCGA ACGGAGGCGA GGGAGACGCG
AGGACTGACG AGGGCGGATC TATCGACGCG CGCGCGCAGC TCATCGGCGA CTCGGGCGTC
GGTAAGTCGT GTCTGTTGCT TCGCTTCGCG GACGATACGT ACACGGGGAC GTATATCTCG
ACGATCGGGG TTGATTTTAA GATTCGCACG GTGGAGCTGG AGGGTAAGAC GATCAAGCTT
CAAATTTGGG ACACCGCGGG GCAGGAACGA TTTCGGACGA TCACGTCGTC GTACTACCGC
GGCGCGCACG GCATCATCGT CGTGTACGAT GTGACCGACA TGGAGAGTTT TGAGGCGGTG
AAGGGATGGT TGAACGAGAT CGATCGCTAC GCGAACGAAA ATGTGAACAA GTTGCTGGTG
GGGAATAAGA GCGACTTGAC GAGTCAAAAG GTGGTGGATT ACGCGACGGC GAAGGCGTTC
GCGGATGAGA TTGGGATCCC GTTCATAGAG ACGTCGGCGA AGAATGCGAC GAACGTTGAG
CAAGCTTTCA TGACCATGGC GAACGAAATT AAGAACCGCA TGGCGAGCCA ACCGCAAATG
AACGCGGGTC CGCGAGGAAA CACCGTGCGA CCGGGCGAAG GTCGCAGCGT CAACGCGAAG
AGCTCTTGCT GCTAG
 
Protein sequence
MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DTYTGTYIST IGVDFKIRTV ELEGKTIKLQ 
IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDMESFEAVK GWLNEIDRYA NENVNKLLVG
NKSDLTSQKV VDYATAKAFA DEIGIPFIET SAKNATNVEQ AFMTMANEIK NRMASQPQMN
AGPRGNTVRP GEGRSVNAKS SCC