| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_1178 |
|---|
| Symbol | |
|---|
| ID | 5002919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009361 |
|---|
| Strand | - |
|---|
| Start bp | 64204 |
|---|
| End bp | 66030 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640418340 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418823 |
|---|
| Protein GI | 145348783 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
|---|
| TIGRFAM ID | [TIGR00376] DNA helicase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.243815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AGACGCGGTC GAGCGCTGTT GGGATTGACC GCGACGGATC TTCGCGGCGG TTTGCTCGGG
CAGACGATCG TGACTTTAGA GCTCGCGAGT CGGCCGAATG GTTCGGATGC TTTGCCGTTG
CCGCCGCATA AGCTGAGTCC GCACGATGTG GTTTGCTTGA GGCCGAATAA GTCTTCGGCG
GAGGGCGAAC CGCTGGCGAG CGGCGTCGTG TATAGAATTC GGGATACGCA AATCGAGCTC
GCGTGCGATG ACATGCCGGA CGAGCTCAGC GGCACGTTAC GTTTAGAACG GTTATCCAAC
GAGGCGACGC ACAAAAGGTT GGTTTCCGCG GTCGAGCGAG TAGGGAAATA TGGGGGTTCG
AGCGACGCGA AACAGCCGGG GGCGCATCTA GTCGGCGTCG CGTTCGGGGA CTCCAAGCCT
CGAGTTTCGA AAACTGGGAA AGAGGTCGAA TGGATCAACA CCGCTTTAGA CGCGTCGCAG
CGTGGTGCGA TCGAGCACGC GTTGCGCTGC GTAGACTTTG CACTGATTCA TGGACCTCCC
GGTACGGGCA AAACGACGGC GGTGGTCGAG TACGTGGCAC AGGAAGTCGC GCGCGGCTCT
CGCGTGCTCG CGTGCACGGC CTCAAATATA GCCATAGACA ACTTAGTCGA ACGCTTGATG
AAAATCAAGC TTCCCGAAGG AGGCGAAATG CGCCTGGTAC GCGTCGGTCA CCCGGCAAGA
TTGCTGCCGT CCGTGCTCGC GGCGTCACTC GAGGCACAAC TCCTGGCGAG CGATAACAGC
AAGCTCGCTA AAGATTGCGC AAAGGAGAGC AAAATATTGC GTAGAAAGTT GTTGAAGCTC
AACGACAGAA AAGATCGCGT CGAACGGAAC GAAGTTCGCA AGGAGCTGAG AGTGCTAGCA
AAGGAGGAAC GGAATCGTCA AAAGGCGGCG ATGAGGGATG TCGTCGACGG CGCGCGCGTC
GTGTGCTCAA CGCTCAGTGG AGCGCTGTCG GGAACGTTGA AATTTCAAGA TTTCGATGTC
GTTGTCATAG ACGAAGCCGC CCAGGCGCTC GAAGCCGCGT GCTGGGGAGC AGTCTTAAAA
GGTAAGAAGA CTGTGCTCGC CGGCGATCAT TTGCAGCTTC CGCCTACGGT GATCTCGGAT
GAAGCGCAGG CGAAAGGATT GAGCGACACG CTTTTTCAAC GGCTTCACGA CATGTACGGC
GATTTAGTTG CTCGTATGCT TACCGTGCAG TATCGCATGC ATGCTGATAT CATGACGTGG
TCCTCGGAGG CGATGTACCA AGGTAAGCTC ACTGCGGCGG AATCCGTCGC GACGCATCGA
CTTCGAGGCG ACGGCGAGGA CGACCCTCCC GTTTTACTCT TGATCGACAC CGCCGGCTGC
GATATGGACG AGCGCGTAGA AGAGGATGGC GAAAGCAAAG AAAATCCCGA CGAAGCGGCG
GTGGTAATGG AAGTGGTCAG GCGTCTCGTC GCTCGCCACG ACGTCGCCGT GGACGACATC
GGCGTCATCA CGCCGTACAA CGGTCAAGTC ACGGTGCTTC GTGAACTTCG CGCCAGAGAC
GACGCGCTCA AAAATCTGGA AGTGTCTACC GTCGATGGAT TCCAGGGACG CGAAAAAGAA
GCCATCATTA TCAGCGCAGT GCGTTCGAAC GCATCGGGCG AGGTGGGATT CCTCTCCGAT
AGTCGGCGCA TGAACGTCGC CGTGACGCGG GCACGGAAGC ACTGTTGCCT CATCATCGAT
AGCGACACAG TAAGCAGCGA TAGATTTCTA GCGACATTAG TGGAGTATTT CGAGACACAC
GGCGACGTCG CTTCGGCTGC GGCGTAC
|
|---|
| Protein sequence | RRGRALLGLT ATDLRGGLLG QTIVTLELAS RPNGSDALPL PPHKLSPHDV VCLRPNKSSA
EGEPLASGVV YRIRDTQIEL ACDDMPDELS GTLRLERLSN EATHKRLVSA VERVGKYGGS
SDAKQPGAHL VGVAFGDSKP RVSKTGKEVE WINTALDASQ RGAIEHALRC VDFALIHGPP
GTGKTTAVVE YVAQEVARGS RVLACTASNI AIDNLVERLM KIKLPEGGEM RLVRVGHPAR
LLPSVLAASL EAQLLASDNS KLAKDCAKES KILRRKLLKL NDRKDRVERN EVRKELRVLA
KEERNRQKAA MRDVVDGARV VCSTLSGALS GTLKFQDFDV VVIDEAAQAL EAACWGAVLK
GKKTVLAGDH LQLPPTVISD EAQAKGLSDT LFQRLHDMYG DLVARMLTVQ YRMHADIMTW
SSEAMYQGKL TAAESVATHR LRGDGEDDPP VLLLIDTAGC DMDERVEEDG ESKENPDEAA
VVMEVVRRLV ARHDVAVDDI GVITPYNGQV TVLRELRARD DALKNLEVST VDGFQGREKE
AIIISAVRSN ASGEVGFLSD SRRMNVAVTR ARKHCCLIID SDTVSSDRFL ATLVEYFETH
GDVASAAAY
|
|---|
| |