| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_49779 |
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| Symbol | |
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| ID | 5002487 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009360 |
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| Strand | - |
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| Start bp | 586784 |
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| End bp | 589974 |
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| Gene Length | 3191 bp |
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| Protein Length | 918 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | 640417908 |
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| Product | predicted protein |
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| Protein accession | XP_001418525 |
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| Protein GI | 145348163 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.894811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0907147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTCG CACGCGACCG CGCCTGGCGA GACGGCGACG CTAGGCAAAT CGCAGAACTG
CAGACGCGCG TCGTCGATGC GGTTAGAGCG CTGGATCGTG ACGTGCGGAG TCTCACAAAT
GATGAACTGC GCGGGAAGAC GGACGCGTTT CGCGCGCGGC TGCGAGCTGG GGAGACGTTG
GACGATATTT TAGTGGAGGC GTTCGCGGTG GTGCGAGAGG CGTCGACGCG CGAGCTCGGG
TTGACACATT TCGACGTGCA ATTGATCGGG GGGGCGCTTT TGCACGAGGG ATGGGTGGCG
GAGATGAGTA CAGGGGAGGG AAAGACTTTG GTGGCGACTT TACCCGCGTA TTTGAATGCG
TTGGATGGCA AGGGCGTGCA CGTGGTGACG GTGAACGATT ACTTGGCAGC GCGCGACGCG
ACGGAGATGG GAAGGATATA TCGTTTCTTA GGACTCACGG TGGGCGTGAT TCAATCTGAC
ATGACTTCAG AGGAGCGGCA GCGGGCGTAC GCGTGTGACA TCACGTATGT GACAAACACG
GAGATTGGGT TCGATTACTT GCGCGACAAC ATGGCAAACG ACGCGGAAGA ATTGGTCGTG
TTGACGCGTC CGTTCAATTT CGCCATCGTG GACGAGGTCG ACAGCGTCTT AATCGATGAA
GGACGCAATC CGCTATTGAT CACTGGCACG GGCGACGTGA ACGACGACGA TCAGTACGTG
ACCGCGGCTA AAGTTGCGGA AAGCTTAATC CCCGGGCGCG ACTTCAAAGT CGTCTTGAAG
GAGAAAACAG CCGAACTCAC CGACGAAGGC ATGTTGCACG CGGAGCAGAT CCTCGGTGTG
AACGATCTGT GGGATGCAAA AAACCCTTGG GGCAAGTACA TTCTGCTCGC CGTCAAGGCA
AGGGCGCTCT TTATCAAGGA CATCGATTAC ATTGTGCGAG ACGGCAAAGT CATCATCGTC
GATCCGTCCA CCGGGCGAGT GCAGATGAAT CGGCGATGGA ATGATAACTT GCATCAAGCC
GTCGAAGCGA AGGAAGGCGT AGAAATTAAT GGCGAGAATT CAATCATCGC ATCCATTTCT
TACCAATGTC TATTCAAGCT ATACAAGAAA CTGAGCGGCA TGACGGGCAC GGCGTCGACG
GAATCGGAAG AGTTCTTCAC CACGTACAAT CTCGGCGTGG CGCGCGTGCC GACGAACAAG
CCCAATTTAC GAATAGATAG CCAGACATCG CTCTTCTTAA ACAGCATACC GAGATGGTAC
GCCGTCGTGG ATTTGATTGA GAGGTGTCAT GCCGAAGGCA GACCCGTACT CGTGGGTACG
ACGTCGGTGG AAAATTCCGA AATTTTGAGT GACTTGCTCT CGCGGCATCG ATGGGTGACG
AACGATGGGC GCAAAATTGC TGGCGTACCA CACGAGCTGC TAAACGCGCG TCCGCAGTAT
GCGGCGAGAG AAGCCGAGAT CATCGCACAG GCTGGGAGAA AGTACGCGGT GACAATCGCC
ACAAATATGG CTGGGCGCGG TACCGACATT CTACTCGGTG GTAGCCCTGT GGGCTTGGCG
AAGCGTGCGT TGAAGGAGAA ACTTTGGCCC GCTTTTGATC TAGGGGATAT CGGTGACGCA
GCTCTGCTCA TGTACGTTGA TCTGTCCCAA GAGGCCCAAA TCACGCTCAA TCAGGCGGAG
CATGTGGCGA CGCAATCCAC TGCCTCGGCG GGATCGCTAA GCGAAGAACA AGCTGAAGAA
TTGTTGGTAG AAGCGTTGGT CAAGGCAGAG GAACTGCTAC GTCGAGGGGA GAAGCCGGGT
GCATGGGATA AGGATCGAGT GTTGATGCAT TTCGTCAACG TTGCCGCGTA CCACGTCTTG
CGAGATTGCC AAAAGCAGTG CTCCGACGAA CGAGAAGAAG TTCGAGAAGT CGGCGGATTG
CAAGTCATCG GTACCTCCAT TCACGACAGT CGACGCGTTG ATAACCAACT CCGCGGTCGC
GCCGCACGTC AGGGTGATCC GGGAAGTACG GTTTTCTGTG TGTCGGCCGA AGACGAGTTG
TTACAAACGT ACATGCCTGG TTGGGGAAAC GATAAGTTGT GGATGTTCGC CGGCGTCGAT
GAGTACTCGC CCATCGTCTC GGATATCGTC GACGGTCAGC TTCGCATGGT TCAAAAGCAA
ATCGAAGACT ACCTGTCATC GCACCGACAG TCCACGTTCG AATCCGATCG CGTGCTCGAT
GGTCAGCGCG AGGCGGTGTA CAAGTTGCGG CGACAAATTC TGCTGAGCAG CCAGTCGGCG
CTGCGTGAGC GCTTGTTCAA GTATATGGCC AGAGTCGTCG ACGACGCGTG CGAACGTGCG
GGTGTTTCGG GCAATGTTCA CCCGAAAAAG TGGAATTACG AACAGCTCTT GAGTGAGCTG
CGTTGCGTGT TTATCGGTCG AACAGATTTC ATCGCCTTGA CGCGCGGATT ACCCACGGGC
GACAGGCCGC ATTACCTTCC GGGCGTGAAT GCGGTCGGGG AGAATTCAAT TCGCGACGCT
ATATTGAGCG GAGGTGATTT ACCCATTCCG CACGAGATGC CACCCTTGAA AGTGGCCCCC
GCTATCGTCC TCGCGGCCAT CGCGGGCGTT GAAATCGTCA TGCCGGAGGG CGTCGTCGGC
CCACTCATGG AAGACACCGA ACCAGAAGCT TCGGACGCCG CCATAAATGA ACGTTTACGC
AACCGTTTAG CTCCACCGTC CGATGTCCGC GACTCGCAGG AGTACATTCG TCGTTGGAGC
AAGGGCTGGC ACGCGGCGAA GGCTCGGCGT TTACGCTCAT ACCTGACTGA ATCCGCCGTG
CAACTGTACT TGGATCGATT CGCGCGTCTG GCTGCAAAAG ACTACGATCG CGCCGAACTC
GAAAGCGTCG AGCGACTTTG GGCTCTTCGC GCCATAGATG AACTATGGCA GCGGCATTTG
GTGCAGATGG AGGTGTTGCG CAGTAGCGTA CAAGTGCGAA GCTTCGGTCA CTTGGACCCG
AAAGATGAGT TTCGCATCGA CGGCGCGCGA GCGTTTGTGT CATTGGTTGA ATCCATTCGC
GAAGCCATGG TTAAGAACAT CTTCTTCTTC ATTGGCGCGA GCGTTGAGCC GACTACTAAT
TTCGATGTCG ACGAGAACGA AGACGCGCAG GAGCGGCAAA CGCAAAATGA ATAGGCTAGA
ATCTAGAACA T
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| Protein sequence | MSVARDRAWR DGDARQIAEL QTRVVDAVRA LDRDVRSLTN DELRGKTDAF RARLRAGETL
DDILVEAFAV VREASTRELG LTHFDVQLIG GALLHEGWVA EMSTGEGKTL VATLPAYLNA
LDGKGVHVVT VNDYLAARDA TEMGRIYRFL GLTVGVIQSD MTSEERQRAY ACDITYVTNT
EIGFDYLRDN MANDAEELVV LTRPFNFAIV DEVDSVLIDE GRNPLLITGT GDVNDDDQYV
TAAKVAESLI PGRDFKVVLK EKTAELTDEG MLHAEQILGV NDLWDAKNPW GKYILLAVKA
RALFIKDIDY IVRDGKVIIV DPSTGRVQMN RRWNDNLHQA VEAKEGVEIN GENSIIASIS
YQCLFKLYKK LSGMTGTAST ESEEFFTTYN LGVARVPTNK PNLRIDSQTS LFLNSIPRWY
AVVDLIERCH AEGRPVLVGT TSVENSEILS DLLSRHRWVT NDGRKIAGVP HELLNARPQY
AAREAEIIAQ AGRKYAVTIA TNMAGRGTDI LLGGSPVGLA KRALKEKLWP AFDLGDIGDA
ALLMYVDLSQ EAQITLNQAE HDRVLMHFVN VAAYHVLRDC QKQCSDEREE VREVGGLQVI
GTSIHDSRRV DNQLRGRAAR QGDPGSTVFC VSAEDELLQT YMPGWGNDKL WMFAGVDEYS
PIVSDIVDGQ LRMVQKQIED YLSSHRQSTF ESDRVLDGQR EAVYKLRRQI LLSSQSALRE
RLFKYMARVV DDACERAGVS GNVHPKKWNY EQLLSELRCV FIGRTDFIAL TRGLPTGDRP
HYLPGVNAAR RLRSYLTESA VQLYLDRFAR LAAKDYDRAE LESVERLWAL RAIDELWQRH
LVQMEVLRSS VQVRSFGHLD PKDEFRIDGA RAFVSLVESI REAMVKNIFF FIGASVEPTT
NFDVDENEDA QERQTQNE
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