| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_49740 |
|---|
| Symbol | |
|---|
| ID | 5002417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | - |
|---|
| Start bp | 606034 |
|---|
| End bp | 609769 |
|---|
| Gene Length | 3736 bp |
|---|
| Protein Length | 1242 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 640417838 |
|---|
| Product | P-ATPase family transporter: phospholipid |
|---|
| Protein accession | XP_001418529 |
|---|
| Protein GI | 145348171 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01652] phospholipid-translocating P-type ATPase, flippase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00391432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.137694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAAC GTTTGCGACG GAAAAGGGCA AAGCCGACGG CGCGCAAATT GGTGCTCGGC
GCGGGCGAAC CGAACGACGG GAAGGATTTG GCGAAGGAGT TTAAGTGTAA GGATAATTCC
ATCTGCACGG GGAAGTACAA TGTCGTGACT TTCGCGCCGA AGGGGCTGTA CGAACAGTTT
CGTCGGGTGG CGAACCTGTA TTTCTTGTCC GTGGCGGTGA TTTCGCTCTT TCCGACCGTC
TCGCCGATCC AGCCGTACAC GACGTGGACG CCCTTGACTA TGGTGATTGG GCTGTCGCTG
GCTAAGGAAG CGGTAGAAGA TTACAAGAGA CACGTGCAAG ATCGCGTCCA AAACACGTCG
ACGACTGAAC GATTTAACGG GGAGTCGTTT GAGAACTGCG AGTGGCACGA CTTGAAGGTC
GGCAACATCG TGCGCGTGGT GCGAGACCAG TTTTTCCCTT GCGACCTCAT CATGCTCGAT
AGCTCGAGTG ACGAAAACGC GTGTTACGTC GAGACGAAGA ACTTGGACGG GGAAACAAAC
TTGAAAACCA AGCGTTCGGT TGACGTCGCG GACTTGAAGT TTGATCGCGA AACGTTTGCG
AAGATGTCCG AGGGAAAGAC GTTCATCGAA TGCGAGCATC CAAACAACTC TTTGTACACG
TACTCTGGAA ACTTGTCCAT CGGCGCGCCG TTGTACCCGA ACGGTAAGAA AGTCTCGCTT
AATCCTTCAA ATATGTTGCT GCGAGGTTCA AGTCTTCGCA ACACGGAATG GATCGTCGGC
GTGTGCGTGT ACACTGGACA CGATTCAAAG GTTATGATGA ACGCCACGGA TACCCCGTCT
AAGCGCTCGC ACCTCGAAAA GCAAATGGAT GGGGTCGTCA TCACCATGTT GATAGCGCTG
TTCGTTATGA GCACGGCCTC GGCGATTTAT TGCTCCGCCT GGATTGGTAG CGGCGCGAAG
GACCATTGGT ACTTGGCCGT GCACTTACAG GATGTTACGT TCAATCCGGA TAACAGAACC
AGCGTTGGTG TTATTGCCTT TTTCACGTCC TACGTCCTAT ACGGCTATCT TATTCCAATC
TCTCTTTACG TTTCTTTGGA GTTGGTGAAG GTTTTCCAAG GATTTGTCTT CCTGAACAAG
GATCGAGCGA TGTACCACGA AGAGACGGAC ACTCCCGCGC TCGCGAGAAC GACCAACCTG
AATGAAGAGC TCGGTATGGT ACACACCGTG CTGAGTGATA AGACTGGTAC CCTGACGTGC
AACACGATGG AGTTCTTCAA GTGCTCGATC GCTGGCGTCG CGTACGGCGA GGGTGTGACG
GAGATAGAAC GAGCCATCAT GCAGCGCAAG GGCGAGCCGT TGCCACCAAA AAATGGTGAC
GCAATCGAGC CATCGTTCAA TTTCCGCGAT AAGCGACTTG AGAACGGAGC GTGGCATAAG
AGATCAGACG CTGACATTTG TCGCGGTTTT TTCCGTGTAC TCGGCATTTG TCAAACGGTT
ATTCCTGAAG GAAATCCTGT CCCGTCTGAA ATCGTTTATC AGGCGGAGAG CCCGGATGAA
CTTGCGTTCG TCGTCGCGGC AAAGCGCTTC GGCTTCTTCT TCAAGCATCG TTCGGCAACG
ACAATCACGG TTGAGGAAGA AGCATTCAAT GACGGGCGAC CGGGGACGGA GGACGTGACG
TACACCATTC TCAACACGCT GGAGTTCACG TCGGCTCGAA AGCGCATGAG CGTCATCGTG
AAGAGCAAAA ACGATGGACG TATCCTTCTC TTCACCAAGG GTGCCGACAA CGTCATTTAT
GAGCGACTGT CTCAGAACGG CAATGAATTC AAGGATGCGA CCCAGGAGCA CATGGATGCG
TGGGCAAAGT GCGGTTTGCG CACGTTGTGC CTCGCGCGTC GAGTCATCAA CCCTTCTGAG
TACGCTTCGT GGAATGAAAA GTTCATCGAG GCGAGCCAAG CTCTCCAAAA TCGTGAAGAG
AAACTGGAAG AGGTGGCGAA TCTCATCGAG AAAGACCTCA CGCTGTTGGG CTCGACTGCG
ATTGAAGACA AATTGCAAGT CGGCGTACCG CGTACCATTG AACAACTCAT GAAGGCAAAC
ATCGCAGTTT GGGTACTCAC CGGTGACAAG CAAGATACTG CGATAAACAT CGGGCAAGCG
TGCTCGCTCA TCACTCCGCA AATGAAGGTC CGCGTCATCA ACGTCGAAGA TTTGGTTAAA
CAAGAAAACA ACGGCGAGAT CGACAGCGCG ACATTTCAAC GCCTCGCCAT GGCCTCAGTG
AAGCAGCAGA TTGAAGCTGG TTTAGTAGAC GCCGAAGCCG CGATTCAGCT CGACGCCGAC
GTCGGTATGG TTATCGACGG TCGTTCGCTC ACGCTGGCTC TCAAACCAGA GCTCGCCGGA
AGCTTCCTAG CCCTGGGAAC CAAGTGCAGC GCGGTTATTT GCTGCCGCGT GTCGCCTTTA
CAAAAGGCGC TCGTGACGAC TCTCGTGAAG GATTCTGGAC GCATCACGCT CGCTATCGGT
GACGGTGCGA ACGATGTCGG GATGATTCAA GCCGCTCACA TCGGTGTCGG CATCAGTGGC
CAAGAGGGTA TGCAAGCAGT CATGGCGTCG GATTTCGCAT TTGCCCAGTT CCGCTTCTTG
GAGCGCCTTC TTCTCCTCCA CGGTCGATAC AATTACAAGC GAATTGCACG CATGGTGACG
TACTTCTTCT TTAAGAACAT CGCTTTTGGT TTGACTATTT TCATATTCAA CATGCACACC
AAAGCCAGCG GACAGACTGT GTACAACGAT TGGCTGATGT CGTCGTTCAA CATTTTCTTC
ACCAACTTTC CGGTACTAGC GCTCGGTATC CTTGACCAAG ACGTGAAACC GCAGAGTTCG
ATGGAGGTTC CGGAACTGTA CAGAGAAACA CAGGCGAACT CACAGTTTAC GTCGCGCCGT
CGTTTGACTT GGTTTGCGTA CGGTATTTAC GTCGCGGTTG TGAGCTTCGT TATGGTCTTC
TACGGCATCC ACACGGGCGA AGCGGACGCG GAAAGCGGAC AGCCGTTTGG GCTGTGGGAG
GTCGGAACGA CTTTGTACAC TGCGCTCCTC ATCGCTTTGA ACGTACAACT CGGATTGTTG
TGCAACTTTT GGACTTTATT TCATCACGTA GTCATATGGG GTTCCATCCT ACTGTGGTTC
ATCTTGAACA TGGCGTTAAG TGAGACGGAA GTGTACTACT CCACTTACAG TTACAAGACG
TTTTTACCGA TAACGTCTCA GGTGATGAAA TACTGGCTCG GGTTTTGGCC GGTGGCGATC
ATCTCCATCT GGCCCTACAT TGCGTCCATC ATGTTCATGC GATATTTTAG GCCGACTTTA
GCCGATGAGG TGCAAGATAG AGACGCAGCT ATCCGGAGGT CGTCCGGCGG AAAGAGCGAA
AAGGAGGGCG TCGAGCCTCG CCAAAAAGTG GACGTTGAAC TCAAGTCGCC TCGAAGAAGT
GGTACTTTAC ACGGCGTCGT CGTTGAAAGC TTAGGAATCG CTCCGGTGAA AGCGGAGGAG
ATCAAGGCGC CAAAACACCG TCGTAAACTG TCTTTCGCTG ATGTTTGGGG CAAAGAAACG
CAATTTCCCG ACGTCCCAGG AGGTCGCCGG AGTAGCCAAG ATCGCACTCC GACGCATTCG
CGCGGCGTGA GTCTAGAGAG CTTGTCTTTA CCCACGCTAC CCGAGGATAG AAGTGCGCGC
GATTTGTAAA CTATTT
|
|---|
| Protein sequence | MVERLRRKRA KPTARKLVLG AGEPNDGKDL AKEFKCKDNS ICTGKYNVVT FAPKGLYEQF
RRVANLYFLS VAVISLFPTV SPIQPYTTWT PLTMVIGLSL AKEAVEDYKR HVQDRVQNTS
TTERFNGESF ENCEWHDLKV GNIVRVVRDQ FFPCDLIMLD SSSDENACYV ETKNLDGETN
LKTKRSVDVA DLKFDRETFA KMSEGKTFIE CEHPNNSLYT YSGNLSIGAP LYPNGKKVSL
NPSNMLLRGS SLRNTEWIVG VCVYTGHDSK VMMNATDTPS KRSHLEKQMD GVVITMLIAL
FVMSTASAIY CSAWIGSGAK DHWYLAVHLQ DVTFNPDNRT SVGVIAFFTS YVLYGYLIPI
SLYVSLELVK VFQGFVFLNK DRAMYHEETD TPALARTTNL NEELGMVHTV LSDKTGTLTC
NTMEFFKCSI AGVAYGEGVT EIERAIMQRK GEPLPPKNGD AIEPSFNFRD KRLENGAWHK
RSDADICRGF FRVLGICQTV IPEGNPVPSE IVYQAESPDE LAFVVAAKRF GFFFKHRSAT
TITVEEEAFN DGRPGTEDVT YTILNTLEFT SARKRMSVIV KSKNDGRILL FTKGADNVIY
ERLSQNGNEF KDATQEHMDA WAKCGLRTLC LARRVINPSE YASWNEKFIE ASQALQNREE
KLEEVANLIE KDLTLLGSTA IEDKLQVGVP RTIEQLMKAN IAVWVLTGDK QDTAINIGQA
CSLITPQMKV RVINVEDLVK QENNGEIDSA TFQRLAMASV KQQIEAGLVD AEAAIQLDAD
VGMVIDGRSL TLALKPELAG SFLALGTKCS AVICCRVSPL QKALVTTLVK DSGRITLAIG
DGANDVGMIQ AAHIGVGISG QEGMQAVMAS DFAFAQFRFL ERLLLLHGRY NYKRIARMVT
YFFFKNIAFG LTIFIFNMHT KASGQTVYND WLMSSFNIFF TNFPVLALGI LDQDVKPQSS
MEVPELYRET QANSQFTSRR RLTWFAYGIY VAVVSFVMVF YGIHTGEADA ESGQPFGLWE
VGTTLYTALL IALNVQLGLL CNFWTLFHHV VIWGSILLWF ILNMALSETE VYYSTYSYKT
FLPITSQVMK YWLGFWPVAI ISIWPYIASI MFMRYFRPTL ADEVQDRDAA IRRSSGGKSE
KEGVEPRQKV DVELKSPRRS GTLHGVVVES LGIAPVKAEE IKAPKHRRKL SFADVWGKET
QFPDVPGGRR SSQDRTPTHS RGVSLESLSL PTLPEDRSAR DL
|
|---|
| |