| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_45915 |
|---|
| Symbol | |
|---|
| ID | 5002533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | + |
|---|
| Start bp | 639107 |
|---|
| End bp | 640678 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640417954 |
|---|
| Product | AAAP family transporter: amino acid |
|---|
| Protein accession | XP_001418292 |
|---|
| Protein GI | 145347683 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGATGCGC GCGCGCGCGA CGCCGCGCGC GCCCGCCGCG CGCGCGACGT CCGCGGCGCG
CGCGCGACTC GGACGCGCGG CGCCGACGCG ACCCGCGCGC GACGCGCGCG AACGCGACGC
GCGACGGCGA CCGAAGACGC CATCGCGACG ACGACCGAAG ACGCGCGCGG TCGTCGACGC
GCGCGAACGA CCGCGGGGCG CGGGGCGCGG CGCGCGAACG TGGGACGACG CGGACGCGAC
GCGAGAGGTC GGGACGAGCA CGACGGCGCA GGCGCGCGCG AACGCGGTGA ATATCTTGCT
CGGCGTGGGG ACGCTGAGCG TGCCGTACGC GCTGCGCGAG GCGGGATGGA GCGGATTGGG
GGTGCTGATG ACTTTGGGGG TGGTGACGAA TTATACGGGG AAGATTTTGA TCAAGTGTCA
GCGGCGAGGG AGCCTGCCGG CGAATGAACG GTCGGTCGAC GTGAGAAACG CGGCGGAGCT
CGCGATGAAC ACCGGAGTGT GCGGCGATGA ATTTTGCGCG GATGTGGACT ACGACGACGC
GCGGTTTCGG GCGATGCGAT CGCCTCGTCG GGCGTTGATG TCGTACGAGG ACATCGGAGA
GGCCGCGTTC GGGGTGAACG GGCGGAATTT CATCACGTTC GTCTTGTACA CGGAGCTGAT
TGGCACCGCA GGCTTGTTTT TCATTCTCGA GGGCGATCAT CTGGCGAAGC TTTTCCACAT
GCAAGGTAAA GAGGAACTCT TTTCCGCATG CGCGGCGCTC GCGATGGTGC CAACGACGTG
GCTGTTAGAT TTATCCAGCC TGTCGTACGT CGGCGCGCTC GGCTTGTGCG CTTCGGTGAG
CGTCACCGGC GTGATGCTGT ACGAATTATT TAGCCAAGTC ATATCGACCG GAGAGTTGCC
TCGGGCGGCA GCCGAGACGG CGATGATACA TTACTCTACG TTTCCCGTGA GCTTTGGCCT
TTTGGCTTTC GTGTTCGCCG GTCACGCGGT GTTTCCCGCG ATTTACGCGA GCATGGAGAA
GCCGGAAGAG TACGAGGAGA TGCTCGACAA TTCTTACGCC ATCGTGGCCT TGAACTGTCT
CGCGCTCGGC GTTGCGGGAT ACTGCTTATA TGGCGACAAC GTTGCTGATC AAGTCACCCT
GAACCTTCCA GCGGGATCGC TCGCCACACT CGCGTTCGCG TTGATTACTG TGAACCCGTT
GGCGAAATTC GCGCTGACTT TGGATCCCGT CGCCAAGGGC GCCGAAGAAA AACTCAAGCT
CCGCGTCAAG GAGTCCAGCA AAGATGCATT CATCTCTCGG CTTGTTCGTA CCACGCTCGG
CGTCACTGCG CTCGGTATCG CCGTCAAGCT TCCATTTTTT GGCGTCGGCA TGTCGCTCAT
CGGCAGCGTG TTGACGCTCA CCGTCTCTGT ACTGTTTCCA TCGCTGTGCT ATCTCCGCAT
GTTCGACGAC GACATCGACG ACGCCGAGAA ACTCATCAAC TACGCGATAT TAGCCATCGG
CACCGCGTGC GTCGTTTCCG GCACCGCTGG CGCGCTCGAC TCCGCCTTCG CCGTCGCCGC
GTAACCGACG CC
|
|---|
| Protein sequence | MRARATPRAP AARATSAARA RLGRAAPTRP ARDARERDAR RRPKTPSRRR PKTRAVVDAR
ERPRGAGRGA RTWDDADATR EVGTSTTAQA RANAVNILLG VGTLSVPYAL REAGWSGLGV
LMTLGVVTNY TGKILIKCQR RGSLPANERS DIGEAAFGVN GRNFITFVLY TELIGTAGLF
FILEGDHLAK LFHMQGKEEL FSACAALAMV PTTWLLDLSS LSYVGALGLC ASVSVTGVML
YELFSQVIST GELPRAAAET AMIHYSTFPV SFGLLAFVFA GHAVFPAIYA SMEKPEEYEE
MLDNSYAIVA LNCLALGVAG YCLYGDNVAD QVTLNLPAGS LATLAFALIT VNPLAKFALT
LDPVAKGAEE KLKLRVKESS KDAFISRLVR TTLGVTALGI AVKLPFFGVG MSLIGSVLTL
TVSVLFPSLC YLRMFDDDID DAEKLINYAI LAIGTACVVS GTAGALDSAF AVAA
|
|---|
| |