Gene OSTLU_41357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_41357 
Symbol 
ID5002504 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp477961 
End bp479144 
Gene Length1184 bp 
Protein Length261 aa 
Translation table 
GC content59% 
IMG OID640417925 
Productpredicted protein 
Protein accessionXP_001418254 
Protein GI145347606 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00590] proliferating cell nuclear antigen (pcna) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0563637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.130673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG CCAGAATCAA GCAAGGCGCC GTGCTCAAGA AAGTCCTCGA CTCGGTCAAG 
GACCTCGTCA CCGACGCCAA CTTCGAGGCC GACCCCGTCG AAGGTTTCAA ACTCCAAGCC
ATGGATTCGA GCCACGTCTC GTTGGTCTCG CTCAAGCTTC ACGCCGATGG CTTCGAGCAC
TACCGATGCG ATCGCGCGTT GACGATGGGG ATGAACCTGG CAAATATGGT GCGTCGATCG
GCGTCGTCGA ACGGGCGTCG TGGCGCGCAC GCGCGCGGCG CGAGGCGATT CCACGCGCGA
TCGGGTCGTT CGCGGTTCGC GGTCGGCGCG CGCGATGCCG CGCGTGTGTG ACGCCGCGTG
ACGTCGCGTG GGGGATGCGT CGACGTGGAA CGGTGAAAGA AAATTGTTTG GGTCGAACGG
CGCGGTCGCG CGCGGTGATG CGCGCGCGCG CGAGGTGGAC GCGTGCGATG CAGTTGACTG
ACGAGTTTTG CTGGTTTGAT TTTAAACTCC TCGCAGGCGA AGATGTTGAA GTGCGCCGGT
AACGATGACG CGATCACGAT GAAGGCGGAT GACGCGGGTG ATACCGTGAC GTTCATGTTT
GAATCTCCGG GTGCGTGGCG ACGCGCGCGC GCGAACGAGC GAGTGTAGGA GCGCGACGAC
ACGCGAACGT GTTCAAAGCG CCAGACGACT GACGAGACGA CACCTTTCCA CGCTTGACAG
ATCAACAAAA GATTTCGGAC TTTGAATTGA AGCTAATGGA CATCGACAGC GAACACTTGG
GGATTCCGGA GACGGACTAT GACGTCACAC TCAGAATGCC TTCGGTTGAG TTTCAACGCA
TCTGCCGCGA CTTGGCGTCC ATCGGCGATA CGGTGGGCAT CAGCGTGACG AAGGATGGCG
TCAAGTTTTC TACTACGGGT GACATTGGTG AAGCGAACAT TACCGTGCGC CAAAACTCCG
AGGATGACAA GGACAAGATG ATCGCCATCG AACTCGGCGC GCCGGTGAGC TTGACCTTTG
CGCTCCGCTA CTTGAACTCT TTCACCAAGG CGACTCCGTT GTGCGACCAA GTGATCGTCC
GCTTGAGCCC GAACTTGCCG GTCGTCGTGC AGTACGCTGT TACTGAAGTT GGCTATGTCT
CGTACTTCCT GGCGCCGAAG ATCGAAGATG ACGACGCTAT GTAG
 
Protein sequence
MFEARIKQGA VLKKVLDSVK DLVTDANFEA DPVEGFKLQA MDSSHVSLVS LKLHADGFEH 
YRCDRALTMG MNLANMAKML KCAGNDDAIT MKADDAGDTV TFMFESPDQQ KISDFELKLM
DIDSEHLGIP ETDYDVTLRM PSVEFQRICR DLASIGDTVG ISVTKDGVKF STTGDIGEAN
ITVRQNSEDD KDKMIAIELG APVSLTFALR YLNSFTKATP LCDQVIVRLS PNLPVVVQYA
VTEVGYVSYF LAPKIEDDDA M