Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_41266 |
Symbol | |
ID | 5002224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009360 |
Strand | - |
Start bp | 283110 |
End bp | 284270 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | |
GC content | 60% |
IMG OID | 640417645 |
Product | predicted protein |
Protein accession | XP_001418431 |
Protein GI | 145347969 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0574303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0646612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGACGCGTTC GAGGCGTCAT GTCGGACGAA TCCGAGGCCA GGGAATTCCC GGTGGTGTGC GAGGACTGCC TCGGCCCCAA CCCGTACGTG CGCGTGCAAA AGATGCCGCT CGGCGGCGAG TGCGCGATCA GCGGTCGCCC CTTCACCGTG TTTCGCTGGC GACCCGGGAA CGAGGCGAGG TACAAGAAGA CGGTGGTGTG CAAAGAGATC GCGCAGGCGA AGAACGTGTG CCAGGTGTGC CTGCTGGATT TAGATTACGG GATACCCGTC GCCGCGCGGG ACGCCGCGCT GGGACGCGCG GGAGGGAGCG CGCTGCCGTC GAGCTCGGTG AACCGGGATT TCGCGGTGAA TGAGATCGCG AAAAAGCTGG ACGAGGGCGA GGACGCGTAC GAGAAGGATG GGAAGGAGAA AAATAACGAA CTGTTGATGC GGTTGGCGAG GAAGAAGCCG TATTATAACA AGAATAAAAC GCCGATATGC ACGTTTTGGT TGAGAAACGC GTGCACGAGG AACGATTGTC CGTATCGACC TTGCAACGGG GATACGCACA TGCCGGAACT GAGCGCGGCG CCAGAGTTGA GAAAGCAAAA TATTAAGGAT AGATACTTCG GGACGAACGA TCCGGTGGCG GAACAAATGC TCAAACGCGC GAAAGAGCGA CCGAGCCAAA AGTTGACGCC ACCCGAAGAT GCGAGCATCA CCACGTTGTT TGTAGGCGGC GTCGACCCGG AAAAGGTCAC CGAGGACGAC ATCAACTCGC GCTTCTATCA GTACGGCGAA ATCAAGGGCA TTCGCGTGAT TGGGACGAAG AAATGTGCGT TCATCACTTT CGCCACGCGC GAAGGTGCGG AGAAGGCGGC GGAAGATGCG GCGATAAATC TCGAAATCAA CGGAGAGCGA TGCCGACTCC AGTGGGGCAA GTCGGCGGCG AAAAAAGCGA GCGGCAACCA AGGGTCTGCG CCGGCACCGC CACCAACCGT GATGATGATG GCTCCAGGTG TGGAAGCTCC AGCGAATGGG CAGGCTTTAC CGCCAGATAT GCCGGCGCAT GTGGCGATCC CCATGCCTGC GCCGGCCGCG GTGGGGCACG CGACCAAGTA CCCGTCGATG GATCCTTCGC AGATGGGAGC GGTTTCAAAG AAGCAGGAAG CCGAGAAGTA G
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Protein sequence | RRVRGVMSDE SEAREFPVVC EDCLGPNPYV RVQKMPLGGE CAISGRPFTV FRWRPGNEAR YKKTVVCKEI AQAKNVCQVC LLDLDYGIPV AARDAALGRA GGSALPSSSV NRDFAVNEIA KKLDEGEDAY EKDGKEKNNE LLMRLARKKP YYNKNKTPIC TFWLRNACTR NDCPYRPCNG DTHMPELSAA PELRKQNIKD RYFGTNDPVA EQMLKRAKER PSQKLTPPED ASITTLFVGG VDPEKVTEDD INSRFYQYGE IKGIRVIGTK KCAFITFATR EGAEKAAEDA AINLEINGER CRLQWGKSAA KKASGNQGSA PAPPPTVMMM APGVEAPANG QALPPDMPAH VAIPMPAPAA VGHATKYPSM DPSQMGAVSK KQEAEK
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