| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_32338 |
|---|
| Symbol | |
|---|
| ID | 5002518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | - |
|---|
| Start bp | 701233 |
|---|
| End bp | 702846 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640417939 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418552 |
|---|
| Protein GI | 145348217 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5257] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.207682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CCGCGACGCG CTCGACGACG CGCGACGGAC GCGACCGCCG ACGCGAGACG GACGCGGTGC
AGCGCGCGGG TCGTCTCGGC GACGCGCGAA GAGCGACGCG AGGCGCGGCG AAGGACGCGC
GCGGGGCGAC GCGAGGGTTT CCGATCGGTC GACGCGCGAG GACGCGCGAG CGCGCGCTGA
AGCGCTCGAA AGCGCGATGG TGTACGCGTG CGGTGACGAT GGATTGAGCG TGCAAGACCT
GGCGACGCTG GACGTCGGGT CGCTGACGCC GCTGTCGCCG GAGGTGATCT CGAGGCAAGC
CACCATCAAC ATCGGCACCA TCGGACACGT CGCGCACGGG AAATCGACGG TGGTGAAGGC
GATCTCCGGC GTGCAGACGG TGCGGTTTAA GAATGAGCTG GAGAGAAACA TTACGATTAA
GCTAGGATAC GCGAACGCGA AGATATACAA GTGCGAGGAT GAGAAATGCC CGAGACCGGA
TTGCTATCGA GCGTACTCGT CGACGAAGGA GGACGCGCCG GCGTGCGAGG TGAAGGGATT
CGAGGATAAA AAGATGCAGT TGGTGCGACA CGTGTCGTTT GTGGATTGCC CTGGACACGA
TATTTTGATG GCGACCATGT TGAACGGGGC GGCCGTGATG GATGGGGCGT TGTTGTTGAT
CGCCGGGAAC GAGACGTGTC CGCAGCCGCA GACGAGCGAG CACTTGGCGG CGGTGGAGAT
TATGCGACTG AAGCACATCA TCATTTTGCA AAATAAGATT GATTTGGTGC AAGAGAACGC
GGCGGCGAAC CAGTACGATA CGATCTGCAA ATTCATTCAA GGCACGATCG CGGATGGTGC
GCCCGTGATT CCGATCTCGG CGCAGTTAAA GTACAACATC GACGTCGTGT GCGAGTACAT
CATCAAAAAG ATTCCGGTGC CGGAGAGGAA TTTCATCTCC CCGCCGAACA TGATCGTCAT
TCGATCGTTC GACGTGAACA AACCCGGCGC AGAGGTTGAA GAAATTCAAG GCGGCGTCGC
CGGTGGATCG ATTCTCCAAG GCGTGTTGAA GGTTGGTCAA GACATCGAGG TTCGCCCCGG
CATCGTCACC AAGGACGCGG ATGGGAAAAT TCAGTGCAAG CCCATCATGA CTCGCATCGT
TTCGCTGTTT GCGGAGCAAA ACCTGCTTCA GTACGCCGTC CCGGGTGGTT TAATCGGCGT
CGGTACGACG TGCGACCCGA CGCTCACGCG CGCCGATCGC CTCGTCGGTC AAGTGCTCGG
CGAAGTCGGC AAGCTCCCCG AGGTTTTCAC CGAACTCGAA GTCAACTTTT TCCTCCTCCG
TCGTCTCCTC GGCGTTCGCA CCCAAGGCAG CGAGCGCCAA GGGAAGGTAT CGAAGCTCGC
CAAGAGCGAA GTTTTGATGT TGAACATAGG TTCCATGTGC ACCGGCGCGC GCGTCGTCGC
CGTCAAGTCG GATCTCGCCA AGCTTCAGCT CACGTCGCCC GTGTGCACCA AGGTTGGCGA
AAAAGTCGCG TTGAGTCGTC GCGTCGAGAA GCATTGGCGC TTGATCGGCT GGGGGTCCAT
TCAGGCCGGC ACCGAGCTCA GCGAATAATA GCACATTACC ATCACGCGTC TTTC
|
|---|
| Protein sequence | MVYACGDDGL SVQDLATLDV GSLTPLSPEV ISRQATINIG TIGHVAHGKS TVVKAISGVQ
TVRFKNELER NITIKLGYAN AKIYKCEDEK CPRPDCYRAY SSTKEDAPAC EVKGFEDKKM
QLVRHVSFVD CPGHDILMAT MLNGAAVMDG ALLLIAGNET CPQPQTSEHL AAVEIMRLKH
IIILQNKIDL VQENAAANQY DTICKFIQGT IADGAPVIPI SAQLKYNIDV VCEYIIKKIP
VPERNFISPP NMIVIRSFDV NKPGAEVEEI QGGVAGGSIL QGVLKVGQDI EVRPGIVTKD
ADGKIQCKPI MTRIVSLFAE QNLLQYAVPG GLIGVGTTCD PTLTRADRLV GQVLGEVGKL
PEVFTELEVN FFLLRRLLGV RTQGSERQGK VSKLAKSEVL MLNIGSMCTG ARVVAVKSDL
AKLQLTSPVC TKVGEKVALS RRVEKHWRLI GWGSIQAGTE LSE
|
|---|
| |