| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_24651 |
|---|
| Symbol | |
|---|
| ID | 5002569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | + |
|---|
| Start bp | 196464 |
|---|
| End bp | 197934 |
|---|
| Gene Length | 1471 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 640417990 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418181 |
|---|
| Protein GI | 145347456 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5078] Ubiquitin-protein ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GCGAATCACA CGAACGGGCG TCGCGCCGCT CGAACGAACG CGATCTATAG CGCGCGCGCG
CGCGATGTCC TCCCTCATCA CCGCGCGTCT AGCGCAAGAG CGCAAAGATT GGCGCAAAGA
CCACCCGCAC GGCTTCATCG CGAAACCGTC GACGAAGAAG GATAAAAACG GTGACACCAC
CACCGATCTC ACGGTGTGGA ACTGCGCGAT CCCTGGAAAG GCTGATACGC CCTGGGCGGG
GGGATCGTAC CCGCTGCGGT TGGAGTTTGG TAACGATTAT CCGGCGAAGC CACCTCGAGT
GGCGTTCCCA GCTGGATTCT TTCACCCAAA CGTGTACCCG ACGGGTAAGG TGTGCCTGTC
GATTTTGAAC GAGGATAAGG GATGGAAACC GTCGGTGTCG ATCAAACAAA TCTTGATCGG
GGTGCAGGAC TTGCTAGATT CGCCGAATAT GAGCGATCCG GCGCAGCAAG AGGCGTACGA
TCAACTGCGA AGATCAAAGG CGACGTACCT GAAGAGAATC AAAGAGCAGG CGAAAAAGTT
TGGAAGCGCA TCTGGGGGGG CTGGGGATGA GATCATCGTG CTTTGATGCC CGAAACGAGA
GAGGACGCCG AACTCTAAAA GTGCACGCGT TTACGTGAGC GATAGCGCCG ATTTGCGAGA
GCGAGAGGCT AATCAATAGA CATAGAAGCG CCACGTGGGC ACGCGCGTCG TCACAACGTA
TCTTCCTAAT TTCGTTCGTC CGTTCGTTCG TTAATTCGTG CGTTCATTGT ATCATTCGTT
CGTCTCATCG TGTAGTCGTT TCAGAAACTG CATGATGTCC ACGTACTGGG CAGTTTTAAA
GGTCTCTTTG TGAGCCTCAA ACAGCTGTAG AATCACGTGA AGACGAGCGC GATCGGCTTC
TGGCGACCAA CCTTTCTTTG AGCGCAGATA CTGTCTCAAA TCACGATATC GGCGCTCTAA
GCCGATCGGG TCCTCGTATC GACGATCAGC CATCGCATCA CTATGCTCCC AGGCATCGCG
CAAACTCGTC AGGAGATCAT CGATATCGTA AACCAGAGCC GCCTCATCTA TGAGGTATTT
TGTCATTGGG ATGTCAAGAT TTTCGCAAGC TTGAGAGACA AAGTACGGTT GTAACACGAG
ACCCATTTCA TCGCGAAAGA TCTTCAGTAA AGTGACGTTC GATCGAAGAA CCGCGCACTC
CATATGCGAC GCGTCTGGCT GCACACCACC TTCGTTCTTC AACCAGCGAA GCAAATCAGC
GCTTCGCGAT TCGCGATCCG CCGATCCCCA AGAGTTGATA ATAGTGTTCA CATTCCTTAG
CTCAGGCTTC GCGCCTTGAT CTTTCAAAAC CTTCAAGAAA TCTATCACAG AGTGCTTGTG
ATATGATCCG TTCGAGATGA TGTCGTTGAA AAAGTCGTTG AGAATGAAAG GTGAAGATTC
TGGAAATGAT TTCGCTGCAC ATTCCTCAAA A
|
|---|
| Protein sequence | MSSLITARLA QERKDWRKDH PHGFIAKPST KKDKNGDTTT DLTVWNCAIP GKADTPWAGG
SYPLRLEFGN DYPAKPPRVA FPAGFFHPNV YPTGKVCLSI LNEDKGWKPS VSIKQILIGV
QDLLDSPNMS DPAQQEAYDQ LRRSKATYLK RIKEQAKKFG SASGGAGDEI IVL
|
|---|
| |