Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_24646 |
Symbol | |
ID | 5002271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009360 |
Strand | + |
Start bp | 146635 |
End bp | 148439 |
Gene Length | 1805 bp |
Protein Length | 591 aa |
Translation table | |
GC content | 63% |
IMG OID | 640417692 |
Product | predicted protein |
Protein accession | XP_001418166 |
Protein GI | 145347423 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00339297 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGTCGC GGGCGCGCGC CGGCGCGGCG CGAGGTGTCG GCGCGCGCGC GGCGACCGAC CGTCAGCGCG GCGACCGACC GCCTCAACAC CCCAAAGAAG TAAGTAAGTC AAAGTCGACC GCACTGTATC TTCTCCCGCA CTCGACGACG ACGGACGGGA TGCGGGAGCG CGACGACGGC GCGACGACGC GCGCGCGACG AGCGATCGCC GTCGTCGGCT GCGTCGGCGG CGTCGCGCTC GCGGTGGCGG CGGTGCTCGA ACACGGAGAC GCGATGCGCG CGTGGTACGC GGGCGGCAGC GCGACGGCGA TGCTGGGCGG CGCGGACGCG CGCGCGGAGG ACGTGCGACG CGCGCGCGCG GCGCTGGGAA CGCCGGCGAG ATACCCGAAC AGCGCGGCGG CGAGAGCGAG GCGAGAGAGG CGGACGAAGA CGAGGAAAGA GGCGCGAAGG ATGAAGGCGG GACGAGACGG GGACGGGGAC GCGGCGCGAG GCTTGGACGA CGCGAGTTTA GGGATGTTGG CGCCCGATGC GGTGCCAGAG TACGAGGCGC ACGCGTTTAA AGTGCCGGTG GGAACCGTGG AAAAGACGGC GGAGGAGCTG AATAAGATGG AGGGGTACGG GTACGACGAA CGGGGCGAAC TCGTCGGGGA CGCGTGGCGA CGCGAGTGGC GACGCGCGCA AGACGAGATT ATTCGCGAGA GCCTGATGGA GGAGAGGCAT CAGTCGAGGG TGAGGCATCA CCCGTCGCAC GTCCAGCCGT CGCTCGGGTT TCACCCGCAC GCTGGACTCG GTGCTTCGCA TCACCCTCAC CATCACCGTC GCGGCGAGAA GAAGGCGAGC GGGAAGAAGG CGAAGAGCGA CGACGGCGAC TCGTCCAAGT TGGGCTCGAA GGTTGAGCCG CTCAAGACGC CCGTGTACAT CATGTCCATG GGAGATAAGC CGGTGCGTAA CCCCGATCCC GTGCTCGGTC GCACGGACAG TGAGCGCACG GAGCACTTGC TCAAGGAGCT CGTGAGAGAG TACGGCACGG CGGCGATTAA AAGCTACGTG CGCTTGACGC CCGGGGTGGA CGTGAGCGAC TGGCCCCACG AAGAAGACAC GATGCACTTC GCGCTCAAGT CGATCATGAA GAACAAACCG ACGGGCGCGC AGCTCGCTAC GCTCCCATGG CTTAGCTTTT ACACCAGTCG CGATAAGGAG GGTCATTTTT CGGACAAGTT TGCGAAGGAG CGCAATCTGT ACACGCACAT CGGCTGCTTG TTCGGGCACA TGTTCCAGTG GCAGCTCGCC GCCGACGCGA ACGACAAGCA CGCGTTCATG TTAGAGTCTG ACGCTTTTGA TAGCTCAATC GTCGGCATGC CGTTCAAGGA CATGCAAACG TTGGCCGACA ACGCGCCGAA GGAGTACGAC ATCATCTTTT TCGATCAACC GAGGGACATG ACCTTCGACG AAGCGCCAGA GCATAAATTT AAAGACGCCG GCGGGAGTGA AATTTACTTG TTCCGACTCA AGTCGAAGAA CACTCAAGGC GGACTCTCGG CTTCGTTGGT TTCCAGGTCG TTTTATCCCA AACTTTTCAA GCACCTCTCG CATTTCGGCG GCGACATCGT CGACTCGATG TTAAAGTCGC AGCTCTGCAC CGATTCCATG GTGGACGCCA CTGGCAAGTT CACGGGATTC GGCGCGGGCA ACAAACCGTG GTTGAAGTGT TACTGGGCTT TGCCCGCGAA GAAAGGCAGG GAATCCCACG GCAAGTTCGT CTACAATAAC TACTAAAAGT TCGGCGCGCC GGTACCGGTA TAGTC
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Protein sequence | MASRARAGAA RGVGARAATD RQRGDRPPQH PKEVSKSKST ALYLLPHSTT TDGMRERDDG ATTRARRAIA VVGCVGGVAL AVAAVLEHGD AMRAWYAGGS ATAMLGGADA RAEDVRRARA ALGTPARYPN SAAARARRER RTKTRKEARR MKAGRDGDGD AARGLDDASL GMLAPDAVPE YEAHAFKVPV GTVEKTAEEL NKMEGYGYDE RGELVGDAWR REWRRAQDEI IRESLMEERH QSRVRHHPSH VQPSLGFHPH AGLGASHHPH HHRRGEKKAS GKKAKSDDGD SSKLGSKVEP LKTPVYIMSM GDKPVRNPDP VLGRTDSERT EHLLKELVRE YGTAAIKSYV RLTPGVDVSD WPHEEDTMHF ALKSIMKNKP TGAQLATLPW LSFYTSRDKE GHFSDKFAKE RNLYTHIGCL FGHMFQWQLA ADANDKHAFM LESDAFDSSI VGMPFKDMQT LADNAPKEYD IIFFDQPRDM TFDEAPEHKF KDAGGSEIYL FRLKSKNTQG GLSASLVSRS FYPKLFKHLS HFGGDIVDSM LKSQLCTDSM VDATGKFTGF GAGNKPWLKC YWALPAKKGR ESHGKFVYNN Y
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