Gene OSTLU_15935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_15935 
Symbol 
ID5002459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp768682 
End bp769869 
Gene Length1188 bp 
Protein Length395 aa 
Translation table 
GC content66% 
IMG OID640417880 
Productpredicted protein 
Protein accessionXP_001418330 
Protein GI145347761 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG AGCCGCTCGA GCCGCGACGC GCGCCCGCCG TCGCGGACAC CGATGCGCTG 
GTGGCGCTGG CGCATCGCGC GCGGTCCGGG AACGAGTGCA CGTGCGCCAC GGGGCGAGGA
ACGATCGTCA ACTTTGACTT GCGCGAACCG AACGACGCGC GCGCGTTCGT CGTTCGAGGC
GCGCGCAGGC GCGAAGTCAA CGCGCTGACG TGGCGAAACG AACACGCGCT GTTTCACGCG
TCCGATGCGG TCGTCGTCGA GTTGGATGCG CGTAAGATGA GCGCCGCGGG CGACGCGGCG
GTGATTCGGC GGTTCGAGGG CGCCGGAGAC GTCGTCAACG GCGTCGACGT CGATCAAGAC
GACGCGATGC TCGCGGCGTG CGACGACGCG GGCGAGGTGA TCGCGTACGA TTTGTCCAAC
GGGGAAATTT TGCGAAAGCT TCGCGGACAC GATGGGTGCG TCACGGCGGT GGCGTTTCGA
AGGAAACGCG GCGCGAGCGA GTGCGCGACG GCGTCGACGG ATTGTCGCGC GATGAAGTGG
GACGTCAAGG CGAAGAGCGT GCCCGTGCGG ACGTGGGACG CGAGGAACGT GCTGAGCGCA
GAGGATTATG ATTGTGGAAA GATTACCGCG CGCGCGGAAG ACGAGTCAGC GTCGATCGAC
GCGGGCGCGA GCGCAAAGGC GTTCAATCCG CCGATGCTGC ACTCGTTGGC GTTTTATCGA
GGCGAGACGA GCGAAGAAAA CGCACCGGGC CTTCGCCGCG TCGCCGTCTC CGCGTGTGGT
GATGGATCGG TGATCGTCTT CGATATCGAT CACCCCGGCG TGAGCGGTGG ATCGCGCGCA
TCGAAAGGTA AGAAGAAATC GTCGCTCGCG AGCGCCGGAC CGTTTGCCGA CGGCAGAGTC
GAATGCGTCC GCCTCGGCGC TGACGGCGTC AGGGGTCACA CCAACGCGGC GACGTGCGCT
GATTTCGTGC CTTGGAACAG AACGGGCGAC GTCATCGTGT CCGGTGGCGC GGATCGTCGC
TTATTGGTTT GGAATTGGGT CGACGAGGCG AGCCACGCCG CGAGAGGCCT GCCCGTCGCG
TCGATCGAGC GCGATCGCAA GATCAACGAC CTCGCCTTCG CCGCGGACTC TCGCGCGATT
TGCGTCGCCG ACACGAGTCC GACGCTTAAA CTATTCGCAC TGCGCTAG
 
Protein sequence
MTLEPLEPRR APAVADTDAL VALAHRARSG NECTCATGRG TIVNFDLREP NDARAFVVRG 
ARRREVNALT WRNEHALFHA SDAVVVELDA RKMSAAGDAA VIRRFEGAGD VVNGVDVDQD
DAMLAACDDA GEVIAYDLSN GEILRKLRGH DGCVTAVAFR RKRGASECAT ASTDCRAMKW
DVKAKSVPVR TWDARNVLSA EDYDCGKITA RAEDESASID AGASAKAFNP PMLHSLAFYR
GETSEENAPG LRRVAVSACG DGSVIVFDID HPGVSGGSRA SKGKKKSSLA SAGPFADGRV
ECVRLGADGV RGHTNAATCA DFVPWNRTGD VIVSGGADRR LLVWNWVDEA SHAARGLPVA
SIERDRKIND LAFAADSRAI CVADTSPTLK LFALR