Gene OSTLU_15835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_15835 
Symbol 
ID5002593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp510634 
End bp511206 
Gene Length573 bp 
Protein Length190 aa 
Translation table 
GC content65% 
IMG OID640418014 
Productpredicted protein 
Protein accessionXP_001418262 
Protein GI145347623 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0367369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.333156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG CGGAGGCGGC GGCGACGCGG AAAACGGCGT TCGCGAAGGC GAGTCAGTGC 
TACAAGGGCC TGCGCGATCT CGGGCTGGAC GTCGAGTCGC AGGAGGCGTT CACGGCGTAC
TGCCGCGCGG GCGCGGAGAC GTTTCTGAAG CCGGACGCGG CGCTCGCGGA ATGCTTGCGA
GCGATGCCGT ATCGGAAGGT GGTGATGACG AACACGAGCG AGACGGAAGG GATGAAAGCG
CTGACGGCGC TGGGACTGGA CGCGTCGTCG AGCGATGCGT TCGAGAAGGT GTACGGGGGG
ATTTTCACGG CGCCGGCGTG CAAGCCGCAG CGCGAGGCGT TCGAGAAGGT GTTCGCAGAT
CTGGGACGCG ACGTGGACCC GCGGCGGTGC GTGATGTTTG AGGATTCGAT GAAGAATGTA
AAGGCGGCGA AGTCGTTCGG CATGACGACG GTGTTCGTGC GCACGCGAGG CGAGAGCGTG
CTCGACGACG ACGTCGAAGC GTGTTGCGAC GCCGTCGTCG ACGAGATCGA GTTCGAACAA
CTGCGCCGGC AACTGCCCGA GCTGTTCGAT TAG
 
Protein sequence
MTAAEAAATR KTAFAKASQC YKGLRDLGLD VESQEAFTAY CRAGAETFLK PDAALAECLR 
AMPYRKVVMT NTSETEGMKA LTALGLDASS SDAFEKVYGG IFTAPACKPQ REAFEKVFAD
LGRDVDPRRC VMFEDSMKNV KAAKSFGMTT VFVRTRGESV LDDDVEACCD AVVDEIEFEQ
LRRQLPELFD