| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_15675 |
|---|
| Symbol | |
|---|
| ID | 5002461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | - |
|---|
| Start bp | 154752 |
|---|
| End bp | 157310 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640417882 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418392 |
|---|
| Protein GI | 145347888 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.391705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00350407 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGA TGGAGCGGGA CATGCGCGCG CTGGCGAGCG GCGCGACGGT GGGGTGGCGA
AGGCACGGGG AGTCGATCGG GAGGGCGGCG GCGCGCGCGG CGGGACGGTT GCGGCGCGGC
GCGGCGGCGA CGGAGCGAGA CGAGGGGCGC GCGGAGGCGA TGCGGCGGTG CTGGAGCGCG
TTCGTGGAAT TTGTGGTGCG CTGGGGGATG TCGAGCGAGG TTTGGGGGGT CGGCGCGCGC
TCGGGGGTGT GCGAGGCGTT GACGCGGTTG GCGTGTCGAC GAGACGACGA GGGCGACGGG
GAGGACGGCG AGGGAACGTC GTACAAACCG CCGCACGCGA GAGAGAGCGA TGAAAACATC
GCGATGTGTG AGAAAGATGC GTGCGATTTG CGCGCGGGGG CGTGCGGCGC GCTCGGCGCG
CTCGCGAGAT TGAACGGGAA GGCTTTGCAC GGCGCGTGGG CGACGATGTT GCCGACTTCG
GAACATCAGT TGCGGGAGAA GAGCGTATCG ACGAGTTTGG TGAAAGTGAT CGCGTGTGAT
TCTAGCGCCA AGGTGCGCGG CGCGGCGGCA AACGCGACGA TGGCGCTGTT TGAGGGACCG
GCAAGTCGAC AATACCTAGC CATCGCCGAA CGACGAGAGG CGGCGACGAG CGCCGGCGCC
AACGGCGCGG CGAGTTCGTC GTTAGCGCCG GGATTTGGCG CTCGCGTTCG CTCTTTTTCC
GCGCTGAGTA CAACTTTAGG AGATATGGTG ATCATAACTC TTCGTGCACT TCTGACCGCG
TTGTCACGCG AGAAGAACGC GCAGTGCGCG CGAGAGTTGT GCAAAGCCGT GGCGGCGCTG
TGCGACGCCG TGCCGTTTGA TCGATTCCCA CGAGACCTTC TTCGAGAAAC CGTGGACTCG
ATTCACGCTA AACTCGTGCA TCTATCCGCA GAAACGCCAA GCGATCGATC GACGATACAG
AGCGCGTTGT TCGGAGCGCT GGCATCCGCG CTCTCCGCGC GCGGCGCGAC GCGGGCGCTC
GACGAATACT TGAGCTCGGA CTCGTCGTCA TCCATGATTT ACAGAATGAT CTCGCACGCA
AAAGGTGAGG TCGCAGGATC GCGTTGTGAA GCATTTAGCG TCCTGCGCGC ACTCGTGGTG
CATCACACTG GGGCCGCGAC GCTGATAGGT GATGAATTAC GCGAGTTATT CCCGAGCGCG
GTGTGCGCCT CGGGCGCGGA CGACCGCGTG TGTCAAGCCT CTGCAAGATT GCTCACGGAT
TATCTCGGCT CCGTGAGCGG TAGCGGACAA GTGCGCGACG ACGATGAGGT TGATTTCGGA
ATGATCGCAA GTACTCCCGC ACTTCCCAGT GAGGTTCTAC GAGCGGCGTG GACGAATGCG
ATTGAATCAC AGTTGCCAAC GTGCGCTTTG CATAAATCTG CGCTCACTCG CGTTGCTGGT
TTGAACGTAC TGACTCGAGT GAATTCAAAT GTTCTGACAT GTTTTGGTTC AGATGTGCGA
ACGTTAGATT CGCTTCTATC GATGCCTCAC TCGGTGCTTA GCGGTTCACA TGAGTCGGTG
CCCGCTGTTC GCGCCGCCGC CTGCCGAGCG CTCGGTTTCC TCATCTACCT ACCATGCGTC
AATCTCGAAG AGACCGCGGC GGCACTTCTC ATCGCCGCTG AAGATGTTTC GAAGTCAGTG
AAGATTCCAG CCATGTGGTC ATTGGCTAAC CTCTGCGCGG TGAACGCGAC GAGGGAGAAT
CGGTTATGCG ACGACACTGT CGCTTCGTTG GCAAAAGTTT TGATTGCGAG CGCGGCTGAG
CAAGGAGACA AAGTACGCGC GAGCGCCACG CGAGGAATCG CGCATCTTAT TGCCGCCTCG
ACTTTTGATA CCTCACACGA ATGGCTTCAC AAAGCTGCGC AGAGTTTGGC GAGTTGTTTG
ACCACGGGAA ACGCCAAGAC GCAATGGAAC GCCTGTCTGG GTGTCGCGGC GTTGCTACAG
AACGACTCAG CGATGGATGT GGGCGCATAC TGGGCCGACT TCATCGTGAG AATGCTGCTA
CTACTCGTAA GAGACGCAAA GAATTTCAAG ATTCGTCTAC ACGCCGCCGC AGCGCTCGCG
GTCGGCGCAC GGCATGAGCG CCTGACCTTG GCGTACGTGG ATTCTGTTTC GGTGCTGACG
TTGAGCTTAG AGGCACTCGA GATTCAGAGC ACTGCTTTCG AATCTCAAAG TGCAATGGAT
TTCAAGTATA AACCGGCGCT GATTTGCCAG TTGACGACGA CACTGGTGAG CGTCCTCGCG
GTTGCGCGAG TCGATGGGGC TATTGGTGAC GCCCTTAAGA AGTCGCACGC CATCACGCTC
TCGACGTATC AAAGCTTGCG AGATTACCTT GACGGAGGGA ACAGCGATGC GCGCGTCGTC
GCAAGTTTCA AAACAGCGGT GCCATTGGTG AACAAAGCCA TATTTGACAC ATCCTTAAAT
AATATTGTCG CGAGTTTGCT CGCAACGCAA CCTAGCTTGA GCGCACGAGC GCTCGCCGAC
GCGTTCGGCG CCTTAGCGTT TAGTTTTAGC CACCCATGA
|
|---|
| Protein sequence | MAAMERDMRA LASGATVGWR RHGESIGRAA ARAAGRLRRG AAATERDEGR AEAMRRCWSA
FVEFVVRWGM SSEVWGVGAR SGVCEALTRL ACRRDDEGDG EDGEGTSYKP PHARESDENI
AMCEKDACDL RAGACGALGA LARLNGKALH GAWATMLPTS EHQLREKSVS TSLVKVIACD
SSAKVRGAAA NATMALFEGP ASRQYLAIAE RREAATSAGA NGAASSSLAP GFGARVRSFS
ALSTTLGDMV IITLRALLTA LSREKNAQCA RELCKAVAAL CDAVPFDRFP RDLLRETVDS
IHAKLVHLSA ETPSDRSTIQ SALFGALASA LSARGATRAL DEYLSSDSSS SMIYRMISHA
KGEVAGSRCE AFSVLRALVV HHTGAATLIG DELRELFPSA VCASGADDRV CQASARLLTD
YLGSVSGSGQ VRDDDEVDFG MIASTPALPS EVLRAAWTNA IESQLPTCAL HKSALTRVAG
LNVLTRVNSN VLTCFGSDVR TLDSLLSMPH SVLSGSHESV PAVRAAACRA LGFLIYLPCV
NLEETAAALL IAAEDVSKSV KIPAMWSLAN LCAVNATREN RLCDDTVASL AKVLIASAAE
QGDKVRASAT RGIAHLIAAS TFDTSHEWLH KAAQSLASCL TTGNAKTQWN ACLGVAALLQ
NDSAMDVGAY WADFIVRMLL LLVRDAKNFK IRLHAAAALA VGARHERLTL AYVDSVSVLT
LSLEALEIQS TAFESQSAMD FKYKPALICQ LTTTLVSVLA VARVDGAIGD ALKKSHAITL
STYQSLRDYL DGGNSDARVV ASFKTAVPLV NKAIFDTSLN NIVASLLATQ PSLSARALAD
AFGALAFSFS HP
|
|---|
| |