Gene OSTLU_12608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12608 
Symbol 
ID5002223 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp280244 
End bp281391 
Gene Length1148 bp 
Protein Length345 aa 
Translation table 
GC content59% 
IMG OID640417644 
Productpredicted protein 
Protein accessionXP_001418430 
Protein GI145347967 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000194885 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0659856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGG GACAGGCGGC GACGCAGGCG CCGGCGAACC CGAACGGGGA CTTTCTGGTG 
GCGAATCCGC CGAACGATGG GATAAGCTCG CTGTCGTGGT CGCCGACGGG GAATTTTTTG
GTGGCGACGG CGTGGGACGG AGACGTGCGT GAACGCGCGA GGCGAACGCG AACGCGAACG
CGAACGAGCG AACGAGCGAA CGAGCGAACG ACGGGGACTG ACGAGACGAC GCGGTGCGTC
GAGACGCGAT GTAGGTGTAT TGCTATGAGG TGGCGAACAA TGGGCAGGCG ATGCCGAAGG
CGTCGACGAA GCACGAGGCG CCGGTGCTGT GTAGCTCGTG GTCGAGCGAC GGCGCGAGCG
TGTTCACGGG CGGGTGCGAT AACATCGCGA AGAAATGGGA CTTGGCGAGC GGGCAGGCGA
CGCAGATCGC GCAGCACGAT GGGGCGATCA GACACATGGC GTGGATCGAA CAGGTGGGGT
TGTTAGTCAC CGGATCTTGG GATCGAACGT TGAAGTATTG GGACACGCGT CAGCCGAATC
CCGCGCTCCA GGTTCAGCTC CCCGAACGGT GTTACGCGTT AGATGTCACG CACCCTTTGC
TCGTCGTGGG ATGTGCCGAG AGACAGATTC AGATTTTCAA CTTGAGCAAC CCGCAAGTGC
CGTACAAGCA GTTGTTATCG CCGCTCAAGT ATCAGACGCG ATGCGTCGCC ACGTTTCCCG
ATCGCTCGGG CTACTTGGTC GGCTCCATCG AAGGACGCGT CGCGGTTCAG CACGTGGAAG
ACAATTTGCA AAGCAAGAAC TTTACTTTCA AATGTCACAG AGAAGGCACG CAAGACATTT
ACGCCGTCAA CTCCATCTCG TTCCACCCGA CGTTTGGAAC GTTCGTCACC GCGGGCGCCG
ACGGCAACTT CAACTTTTGG GACAAGGATA GTAAGCAACG CCTAAAGAAC ATGACCAAGT
GTTCGGCACC CATCTCGTGC GGGAACTTCA ATCGCGATGG GACGATTTAC GCGTACGCGG
TGTCGTACGA TTGGAGCAAG GGCGGTGACA ACCCGCTGTC AAACACGCCG AATAACATTT
ACTTGCACGC CGTGAACGAA ACAGAAGTCA AGCCGCGGCC GGCGAAGAGC GGAATCGGTC
GTCGATAA
 
Protein sequence
MSWGQAATQA PANPNGDFLV ANPPNDGISS LSWSPTGNFL VATAWDGDVY CYEVANNGQA 
MPKASTKHEA PVLCSSWSSD GASVFTGGCD NIAKKWDLAS GQATQIAQHD GAIRHMAWIE
QVGLLVTGSW DRTLKYWDTR QPNPALQVQL PERCYALDVT HPLLVVGCAE RQIQIFNLSN
PQVPYKQLLS PLKYQTRCVA TFPDRSGYLV GSIEGRVAVQ HVEDNLQSKN FTFKCHREGT
QDIYAVNSIS FHPTFGTFVT AGADGNFNFW DKDSKQRLKN MTKCSAPISC GNFNRDGTIY
AYAVSYDWSK GGDNPLSNTP NNIYLHAVNE TEVKPRPAKS GIGRR