Gene OSTLU_10549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_10549 
Symbol 
ID5002313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp327419 
End bp327751 
Gene Length333 bp 
Protein Length111 aa 
Translation table 
GC content66% 
IMG OID640417734 
Productpredicted protein 
Protein accessionXP_001418448 
Protein GI145348005 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000151978 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.856804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GATGACATCT TCGAGTTTCA CTTCGCCGTC TTCGGACCGC CGCGAACGGC GTTCGAGCGC 
GGGATATACC ACGGACGGAT ACTGCTGCCG CCGGAGTACC CGTTCAAGCC GCCGTCGTTC
GTGCTGCTGA CGGCGAACGG ACGATTCGAG ACGGGGACGA AGATTTGCCT GAGCATCTCG
CAGCATCACC CGAAGCAGTG GCAGCCGAGC TGGTCGATAC GGGCGGCGCT GACGGCGATG
CGGGCGTTTT TCCCGACGCC GCCGGAGGGC GCGGTGGGAT CGCTGGATTG GAGCGACGAC
GTCAGGCGAG AGCTGGCGGA GGCGAGCTGG CGA
 
Protein sequence
DDIFEFHFAV FGPPRTAFER GIYHGRILLP PEYPFKPPSF VLLTANGRFE TGTKICLSIS 
QHHPKQWQPS WSIRAALTAM RAFFPTPPEG AVGSLDWSDD VRRELAEASW R