| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_87197 |
|---|
| Symbol | |
|---|
| ID | 5001689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | + |
|---|
| Start bp | 136108 |
|---|
| End bp | 137580 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640417110 |
|---|
| Product | MOP(MATE) family transporter: multidrug efflux |
|---|
| Protein accession | XP_001417688 |
|---|
| Protein GI | 145346426 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAG ACGCGAGCGA AGGCGCGGCG AGAGGGGACG CGGGCGCGGC GTGGCTGAGC
GAGGACGCGA CGCCGCGGAA CGACGCGCTG GATAAGCTCA TCATCAGTCT GTTCGTGCCG
GCGATGCTAA ACTTTTTGAT AATCCCGCTC GTGGGCGCGG TGGATGTGTT TTGGGTCGGG
CGATTGGAGG ACGCGGTGGC GCTCGCGGCG CAGGGGGCGG CGAATCAGGT GTTTCAGAGC
GCGTTTTGGA TCATTTCCTT CATTCCGAGC GTCGTCGCGC CCGTGGTGGC GAAAGCGGCG
GCGGGAGGTG ATACGAACGA ATTGTCGAAA AAGATTGGGG AGGGGATCTT CTGCGCCGCC
GTGGTGGGGG CGATGGGGAT GGTGTTGATG TATACGATGC AAGAGCGCGC GTTGGGCATC
GTCGGCGTCG CCGCGGGGAG CGTGACGGCG CATCAAGCGG CGCCTTACGT TGGGTATCGC
GCGCTGACGT TCATTCCAGC GATCGTTTCC ACGGTTGGTT TCGCCGCATT TCGTGGGACG
CTTGACGTGA TGACACCGAT GAAGATTACG TTGGCGAGTC AAATGTTAAA CGTCGTCCTC
GACCCGCTCT TCATCTTCGG CGTCGGCACG TTCAAGGCGA TGGGGGTCGC TGGCGCCGCA
ATCGCGACGT CGATTTCAGA GATTTTCTCT GCGGGTTTGT ACACTACGTT ACTCGTCAAG
CGCAAGCTGG TCGATCTTAA GGATATGTTT AGGCCTCCGA GCGCGGCGGC GTTGGGGACG
CTTCTCGTCG GCGGCGCCGG CGTGCAGCTT CGAGCAGTGG CGCAAAATAT CACGTTCTTG
GCAGTGATGC GCGCCATACT TACGATGGAC TCCACCGGTA CGGCGGCTGC GGCGCACACG
ATCTCGTCGC AGGTGTTTCA GCTCGGTGTT ATCGCTATTT TGGCGTTGAG CACCATCGCC
ACCATTTTGA TCCCCCAGCG CATGAACTCG ATGGAAAAAG GTGGACCTCG CGAAGCCAAG
CGCGTGGCCG ATCGTTTGCT CGTATGGGGC GTTGTTATCG GTGTCATCTT GGCCGTCTTA
CAAGCGGGCG CGATTCCGTT CCTCGGCGTC TTCTCCTCCT TGTCTGAAGT TCAAGAACAG
GCCAAGATGC CCTGCATCAT CGGCGCGTTG CTGCAGCCGC TCAACGGCAT CGTTTTCGTC
GGAGAGGGCT TGATGCAAGG CCATCAAGCT TTCCTTCGTC TTGCCGCGGG CATGTTCGTC
TCCACGGGTG CCATGCTCGT CGCATTGAAC ATATACGGCA ACTCCCTCGC CGGCGTGTGG
TTTTGCTTCA CCGTATTCAA CACGTTTAGA TTGTTCTTCG GCTTGCGTCA TCACTTCTTC
GACGGCCCGC TCGCGCCGCG TCACATCGAC GCCACGATCG CCAAGCTCGA AGTGGAGACC
GCAGCCAAGG CTGCGGCCGC CAAGACGGAT TAA
|
|---|
| Protein sequence | MAGDASEGAA RGDAGAAWLS EDATPRNDAL DKLIISLFVP AMLNFLIIPL VGAVDVFWVG
RLEDAVALAA QGAANQVFQS AFWIISFIPS VVAPVVAKAA AGGDTNELSK KIGEGIFCAA
VVGAMGMVLM YTMQERALGI VGVAAGSVTA HQAAPYVGYR ALTFIPAIVS TVGFAAFRGT
LDVMTPMKIT LASQMLNVVL DPLFIFGVGT FKAMGVAGAA IATSISEIFS AGLYTTLLVK
RKLVDLKDMF RPPSAAALGT LLVGGAGVQL RAVAQNITFL AVMRAILTMD STGTAAAAHT
ISSQVFQLGV IAILALSTIA TILIPQRMNS MEKGGPREAK RVADRLLVWG VVIGVILAVL
QAGAIPFLGV FSSLSEVQEQ AKMPCIIGAL LQPLNGIVFV GEGLMQGHQA FLRLAAGMFV
STGAMLVALN IYGNSLAGVW FCFTVFNTFR LFFGLRHHFF DGPLAPRHID ATIAKLEVET
AAKAAAAKTD
|
|---|
| |