| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_87186 |
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| Symbol | TPR2 |
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| ID | 5001672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009359 |
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| Strand | - |
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| Start bp | 89686 |
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| End bp | 91320 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 640417093 |
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| Product | TPR-repeat containing protein |
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| Protein accession | XP_001417913 |
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| Protein GI | 145346887 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.273766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGG ACGACGACGA CGATGGCGAT GGGCGGGAGA TAAGGCGACG GGACGCCGGC
GCGGGGACGA CGGAGCGGAC GAGCGCGAAC GGCGCGAGAT CGCGCGCCAT GCCCGAGCTG
ACGTACGAGA ACGCGGTGTT GGAAAGAAGT CGTCGCAGCG GGGAGTCGTC GACGATCGCG
AGTCCGGGAT CGAAGATGCA GATGTTGGGG AGCGTCGAGG CGACGAGCGG AGACGCGAAG
CCGCTCAAGA TCAATCAAGA CTTGGCGCTG TACCGCGCGC GGAAATTGCG AAATGAGGCG
GGCTTCATGA AATCCGTGGA TGAGAGGAAC GCAAAGCGCT TAGAGGCGAT AGCGATGTTC
GAGAAGGCGA TGTCGTACGA CGTCACGGAT GGGCGCGCGT ACTGCGGAAT AGGGCAGACA
CTGGTGCAGA TGCGTCGGTT GGATGATGCG CGCGCGATTT ACCAAGCTGG ATGCGACGCC
AAGGGAGGAG ACAACGCGTA TTTGTGGGTT GCTCTCGCCG TGCTCGAGGA AAAGGCTGGG
AACATTGCGC TGGCGAGAAA GTATTACGAC GCGGCGACGG CGGCGGATAA AACGCACGCC
GCGGCTTGGC ACGGATGGGG ATCGATGGAA AAGAACTTGG GAAATTATCA GCGCGCCAGA
GAATTGTACA TCAAAGGTGT GCGGTTGGTG CCGCCGATGG ATGCGTCTGC CCATCTGTAC
CACTCGCTCG GCGTCATGGC GCTCGAGCGC GGGCGTATCT CCGAGGCGAG GGAACATTTC
AGGCAAGGCG TTCGCACAGA GGCGGGAGCG AAATCTGGCG CCATCTGGCG CTCTTGGGCC
ATGTTAGAAG CGAAAGCGGG CGACGAAGAG CAAGCGCGCA AGCTTTTTCA AAAGGGTTTG
ATGGTTGCCC CGAAGAGCAA GTTTATTTGG CTCGCGTGGG GGGTGTGGGA AGCCAAGCTC
GGGTATTGCG ACCGCGCGAA GGAGCTCCTG ACCAAGGGAT GCAAATTGAA TCCCTTGGAC
ACGCATTTGC TTCAAGCACT CGCAAAGCTC GAGGCAGAGC AAGGGAATCT GGAACAGGCG
CGCAAGTACT TTGAGCAAGG GACGATGATG GATCCCCAAC ACCAGGCGAA CTGGAACGCA
TGGGCGATGG CGGAGTGGCG AGCGGGAGAA ATCGATCGCG CGCGCAATCT GTTTCAACGA
GGCGTATGGG TTAATCCAAA GAATCGAGAC GCCGCGCGCT TGTTTCATGC ATGGGGGGTA
TTGGAATCGC GAGAAGAAAA TATCTCCCTC GCGCGACAGC TCTTCAAATG TGCGGTTAAC
GTCGACGCGA GCAGCGAGCG CACGTGGCTT ACGTGGGCCA TGATGGAGGA GAGAGAAGGC
GACGACGTTC GGGCGATCGA GATCAGAAAC ATGTGCTCGC AGCAAATGGC CGAAGCTTCT
GTTGGGGCCA CGGACTTGTC GCCGGCGGCG AGCACTTTCC GCCCCCTGTT GGAACGGCTT
TCGTCCATTC TTGGCTTGGA GGCGCCTGGA GATTCGGACG ACGAAGACGA GGAAGAGTTT
GACGAAAGCG AGCTTTCGAC GGCAGAGCTC ATGTTTGGTA AGTCTGACGC GAGTACATAC
ACATATGAAG AGTAG
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| Protein sequence | MSLDDDDDGD GREIRRRDAG AGTTERTSAN GARSRAMPEL TYENAVLERS RRSGESSTIA
SPGSKMQMLG SVEATSGDAK PLKINQDLAL YRARKLRNEA GFMKSVDERN AKRLEAIAMF
EKAMSYDVTD GRAYCGIGQT LVQMRRLDDA RAIYQAGCDA KGGDNAYLWV ALAVLEEKAG
NIALARKYYD AATAADKTHA AAWHGWGSME KNLGNYQRAR ELYIKGVRLV PPMDASAHLY
HSLGVMALER GRISEAREHF RQGVRTEAGA KSGAIWRSWA MLEAKAGDEE QARKLFQKGL
MVAPKSKFIW LAWGVWEAKL GYCDRAKELL TKGCKLNPLD THLLQALAKL EAEQGNLEQA
RKYFEQGTMM DPQHQANWNA WAMAEWRAGE IDRARNLFQR GVWVNPKNRD AARLFHAWGV
LESREENISL ARQLFKCAVN VDASSERTWL TWAMMEEREG DDVRAIEIRN MCSQQMAEAS
VGATDLSPAA STFRPLLERL SSILGLEAPG DSDDEDEEEF DESELSTAEL MFGKSDASTY
TYEE
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