Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_38932 |
Symbol | |
ID | 5002138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | - |
Start bp | 571097 |
End bp | 571855 |
Gene Length | 759 bp |
Protein Length | 253 aa |
Translation table | |
GC content | 52% |
IMG OID | 640417559 |
Product | ABC(ATP-binding) family transporter |
Protein accession | XP_001418051 |
Protein GI | 145347176 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0950167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGT TCGTCTTTGT CAGATTTAGA TCTCAGCAGC GTTGGAAACT CCGTGAAATC TTTGCGCACA ACGTAGTGCC ACGTTATAAG TACCCTACTA CGGTAGAGCT GAAAAACGTG ACGTGCTCCG TGGATGATGA TCGCATCATA ATTGATGACG TAAGTGCGAC GTTTCACCCA GGGGAAATCG TGGGCGTTCT GGGACCGAGC GGCTGTGGAA AGACGACGCT CATGAACGCG CTTGTTCACG GAAACTTTCT CAAAAGTGGA ACGATATTGG TAAATGGAGA AGAGTTGGAC GAAAAGCGAC ACAACCTCGC GTTTGTTGCG CAGCACACGC CTATGATCGC GCAGTTAAGC GTTTACGAAA CGTGCTGGGT CGCAGCAAGC CTACGACTAC CCTGGTTCTT GCACGCGAAC GAGCTGCATG AGCGCACTCA TGATGTCATA AATTCTCTCG GATTAACACA CGTCTCCAAC TCTCGCGTTG GCGGGACGCT GTCACAGAAA CAAACATTGA GTGGAGGCGA ATTGCGCAGG GTTGCGATCG CGCAGGAGCT GGTTGTGGAT CCAACAACGA TTATCTTAGA TGAGCCGACT TCTGGACTAG ATGCACACAC GTCCTGGCGC GTATTCACAC TCCTGCGTGA TCTCGCATCT CACCAAGAAA AGGTCGTCGT CGCAACCGTG CATCAACCGT CGAGGCGTGT CCTGGATAAT TTTCACAAAA TTCTTGTTCT CACGCAGAAC GGCCGCTTG
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Protein sequence | MAAFVFVRFR SQQRWKLREI FAHNVVPRYK YPTTVELKNV TCSVDDDRII IDDVSATFHP GEIVGVLGPS GCGKTTLMNA LVHGNFLKSG TILVNGEELD EKRHNLAFVA QHTPMIAQLS VYETCWVAAS LRLPWFLHAN ELHERTHDVI NSLGLTHVSN SRVGGTLSQK QTLSGGELRR VAIAQELVVD PTTIILDEPT SGLDAHTSWR VFTLLRDLAS HQEKVVVATV HQPSRRVLDN FHKILVLTQN GRL
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