| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38852 |
|---|
| Symbol | |
|---|
| ID | 5002087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 732657 |
|---|
| End bp | 734438 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640417508 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418096 |
|---|
| Protein GI | 145347269 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1626] Neutral trehalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.569718 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCG AAGACGACGT CGAGGAAGAC GGCGGCGCGG CGACGGACGG CGCGCAGGCG
CCGTACGCGG CGTTTTGCAC GGCGGCGATA CTGGCGGCGG TGCACCGAGC GGCGATTTGG
CGCGACTCGA AGGATTTCGT GGACACGCGG TCGAGATCAC CGCCGGCGAA GGTGTTCGAG
GCGCTGGCGC AGTCGCGAGC GGCGACGTGT AGCGTGGCGG CGCGGGAATT CTTGAACGAA
CACTTCGAGA GCGGACCGAG GGAGAGGTCT AAGATGCCGG AACTGGCGGA CTGGCGAAGC
GAGCCGGCGG TGGCGAGAGG GGCGAGGTGC GAAAAGTCGA GGGAGTTTGC GACGCACGTG
CACGAGCTGT GGCGCGTGCT CGCGCGGTTG GACGCGGATG ACTACGCTGA GGAAGAAGTC
GGCGCGGAGG GCGAGGCGCG ACGGACGACG AGCTCGAGGA TTCGATTGCC GTACCCGGCG
GTGGTGCCGG GGGAACGTTT TAGGGAAACC TACTACTGGG ATACGTATTG GATCGTTTTG
GGGTTGTTAA CGAGCGAGAT GCCGGCCACG GCGCTGGGAG TGACGAATAA TTTGTTGTAC
ATGGTCACCA CGTACGGATT CGTGCCCAAC GGCGCGCGCG TGTACTATTT GAATCGATCT
CAGCCGCCGT TGTTGTCGTC GTGCGTCGCC GAGGTGTTTC AAGCGACGCG AGACGTCGAG
TGGTTGCGAC AGGCGTTGCC GTTGCTGGTG CAAGAATACG CCTATCTCAC TCGAAGTGAA
CGCACGGTGA CGATTCGTGA CACGGAAACC GGAGAGACGC ACGAGCTGTC GCGATATTTT
GCCAACACCA CGCGTCCGAG GCCAGAGAGC TATCGCGAAG ACGTCGAGGT GGCGCGCCGA
GCGACCAGAA AGGTGGAGGA CGCCGTGGCC AAGCTCGAAG CTAAGCGTAA GATATATCGA
CATCTTGCTA GCGCGGCGGA GAGCGGCTTC GACTTCAGCT CGAGATGGTT CCTAGACGGC
GATAACTTGG AGACGATTCG CACGTGCAAC ATCATTCCAT CCGACTTGAA CGGATTTATG
CTACGAGTGG AGACGCAAAT CGCTTTGCTC GCCCGCGAGG CATTAGTGTC GTTGGAAAAC
GAAGACGAGC TCTTCGCCGA GCGCGTGTAC TTGAACCATT TGCTCGAGAA GTTCTCCCGT
GCGAGCGAGG TGCGGCGGCG CGCGATTGAC GCCGTGCTTT GGGACGACGA CGTCAAGCGG
TGGCGAGACA TGGCGTTCGA ACCGCTCATG GGCGAAGACA CCCGAGGAAT CGTGCGCGAT
CGCGATGATC TCACGGCGGC ATCTGAGAGC CCGTTTACGA GCGATTTTAC TCCGCTTTGG
TGCGGCGCTT GCGATCCCGA CAGCGATCAA GCGTACGAAG TCGTCGAGTC GTTGAAAAAG
TCCAAGTTGG TCACCGACAA AGGCATCGCG ACCTCACTCG TCGAGAGCGG TCAGCAATGG
GATTGGCCTA ACGCTTGGGC GCCGGAGACT CACATGATTG TCGAAGCGAT ACAAATTTTC
GCCCCTCGCG AGGAAGAGTA CGCGAAGACG CTCGCGCACT CGTGGCTCCG CACCGCGCAT
CAAGCGTGGA AGTCAACGGG CTACATGCAC GAAAAGTACG ACGTGCGCTC GACCGAGGAC
GGCGTGGGTA AAGGCGGCGA ATACATCCCT CAACGTGGTT TCGGCTGGAC CAACGGCGTG
ACACTTCGAT TACTCGAACA ATACGGATTC CCTCAAGATT GA
|
|---|
| Protein sequence | MTSEDDVEED GGAATDGAQA PYAAFCTAAI LAAVHRAAIW RDSKDFVDTR SRSPPAKVFE
ALAQSRAATC SVAAREFLNE HFESGPRERS KMPELADWRS EPAVARGARC EKSREFATHV
HELWRVLARL DADDYAEEEV GAEGEARRTT SSRIRLPYPA VVPGERFRET YYWDTYWIVL
GLLTSEMPAT ALGVTNNLLY MVTTYGFVPN GARVYYLNRS QPPLLSSCVA EVFQATRDVE
WLRQALPLLV QEYAYLTRSE RTVTIRDTET GETHELSRYF ANTTRPRPES YREDVEVARR
ATRKVEDAVA KLEAKRKIYR HLASAAESGF DFSSRWFLDG DNLETIRTCN IIPSDLNGFM
LRVETQIALL AREALVSLEN EDELFAERVY LNHLLEKFSR ASEVRRRAID AVLWDDDVKR
WRDMAFEPLM GEDTRGIVRD RDDLTAASES PFTSDFTPLW CGACDPDSDQ AYEVVESLKK
SKLVTDKGIA TSLVESGQQW DWPNAWAPET HMIVEAIQIF APREEEYAKT LAHSWLRTAH
QAWKSTGYMH EKYDVRSTED GVGKGGEYIP QRGFGWTNGV TLRLLEQYGF PQD
|
|---|
| |