| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38691 |
|---|
| Symbol | |
|---|
| ID | 5001709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 416852 |
|---|
| End bp | 417535 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | |
|---|
| GC content | 64% |
|---|
| IMG OID | 640417130 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418007 |
|---|
| Protein GI | 145347083 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5078] Ubiquitin-protein ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0430336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.981721 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACG CGTCGTCGCT CCCGCGACGG ATCCTCAAGG TGCGGCGGAC GCGCGACGAA
GGCGACGACG CGAAGGCGAC GACGACGACG ACGACGAACG AGACGACGAC GCGCGACGCG
GTGAAATCGG GCGCGACGAC GGCGGACCGC GGCGAAGGCG ACGCGCGGGA AAACGGCGCG
CGCGAGACGG GAGACGGGAA GGCGACGAGA CGCGACGACG CGAGAATGAC GAAACGACGC
GCGCGACGCG CGATGACGAC GCAGGAGGCG CAGCGATTGC AGCAGGAACC GATTCCGGGG
ATCGCGGTGG AGGTGAGCGA GACGAACCTG CGACACTTTT TCGTCGTCGT GGAGGGACCG
CGGGGAACGG CGTACGAGGG CGGGAAGTTC AAGTTGGAGC TGTTCTTACC CGCGGATTAT
CCCATGGCGC CGCCGGAGGT GTTCTTCAGG ACGAAAATTT ATCACCCGAA CACGGATAAG
ATTGGGCGCA TCTGTTTGGA CGTGTTGAAG GATAAGTGGT CTCCGGCGCT GCAGATTCGT
ACGATTTTAC TCAGCGTGCA GGCGTTGATG AGCGCGCCGA ACCCAGATGA CCCTTTGCGA
GAGAACGTGG CGGAGCACTG GAAAACGGAC GAACACGGAG CGCTGCAAAC GGCGCGAGAG
TGGACGGCGA AGTACGCCAA GTGA
|
|---|
| Protein sequence | MADASSLPRR ILKEAQRLQQ EPIPGIAVEV SETNLRHFFV VVEGPRGTAY EGGKFKLELF
LPADYPMAPP EVFFRTKIYH PNTDKIGRIC LDVLKDKWSP ALQIRTILLS VQALMSAPNP
DDPLRENVAE HWKTDEHGAL QTAREWTAKY AK
|
|---|
| |