Gene OSTLU_38586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_38586 
Symbol 
ID5002019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp753927 
End bp754502 
Gene Length576 bp 
Protein Length191 aa 
Translation table 
GC content66% 
IMG OID640417440 
Productpredicted protein 
Protein accessionXP_001417861 
Protein GI145346781 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.107444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACG GCGTCGCACA AGGCGCATGG GATCCTCACT CGGCGGATGC GTTCGCGTGC 
GGTGTGGACG CTGACGTCGT CGTGTTCGAC GCGCGCACGG CGAGTCGCGC GCAGACGATT
GAAAAGGCGC ACGCCCAGCA AACGCGCGAC GTGCGATACA ACCCGAACAA ACCGCACGAG
ATGATGTCGT GCGGCGACGA CGGATTGCTC AAGATGTGGG ACGCTCGCGC GCACGAGCGG
CCGTTGAAAG TCGTCGCCGG GCACGAGCAC TGGATTTGGA ACTGCGCGTA CAATCCCGTA
TACGACGCTC TCACGCTCAG CGCCGGTTCC GACGGCACCG TGCGTCTGTG GTGCGATGAC
GACGCGTTAC CGAGCGACTC GCACAGCGCT TCACGCGCGG ACGCTCGAAG CGGCATTCGC
GCCGTATCCC GCCGCGTCGT CCGCGCCGAC TCCGTTTCGG CGCGCGCGTG CGCGTGGAGC
GCCGCCGACC CTTGGACGTA CGCCGTCGTC ACCGCCGACG GCGCCTTCAC CGCGCTCGAA
GTTCCGCGCG AGGAAAAATA TAGAATTCTC CTGTAA
 
Protein sequence
MQDGVAQGAW DPHSADAFAC GVDADVVVFD ARTASRAQTI EKAHAQQTRD VRYNPNKPHE 
MMSCGDDGLL KMWDARAHER PLKVVAGHEH WIWNCAYNPV YDALTLSAGS DGTVRLWCDD
DALPSDSHSA SRADARSGIR AVSRRVVRAD SVSARACAWS AADPWTYAVV TADGAFTALE
VPREEKYRIL L