| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38528 |
|---|
| Symbol | |
|---|
| ID | 5001795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | + |
|---|
| Start bp | 692103 |
|---|
| End bp | 693860 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 640417216 |
|---|
| Product | AE family transporter: anion exchange |
|---|
| Protein accession | XP_001417844 |
|---|
| Protein GI | 145346745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00916191 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCCA AGCGAGGCGC CGATTTCACA GGAAAATTTG CTGGGGGTAT TGTGAGCGAT
TTCAAGCGAC GATGGGCGGT GTATAAGAGT GATTGGGTCG ATGGATTCAA GGCGCCGACG
AAGTGCTTGA GCGCGACGCT CTTCATGTAC TTTGCTTGTC TCGGACCTGC AATCGCGTTC
GGGGGGTTGG CGTATAAAGA AACGGACGGG CACGTCGGGG CGATGGAATA TTTGTGCAGC
CAAGCGCTCA GTGGGATAAT ATGGGCCGTG TTCTCGGGAC AGCCCGAGAT CGTGCTACGC
CCGGCGGGTC CGCAGACGGT GTTCCTCATA GAACTGTTCA AACGATGCAA GGCGTGGAGG
ATCGACTTCC TCGTCACGTC TGCGTGGGTC GGGGTTTGGA CTGGGATTTT CATGCTATGT
ATTGCCTCAT TCGACGCGTG CGCTTGGGTC GCGAACAAGT GCACAAAGTT TACGCAAGAT
ATATTCAGTC TCTTTGTGTG CGCGATTTTC ATCTTTGAAG GATTCAAAAA CTTGTTCACG
TACTTTTCAG ACGACAAATA CTCAACCGCA GCCGCTTTGT TTAGCTTGAT GTTAGGTGTC
ATGACGTTAC AACTTGGTCT GTGGGCGGTG CATCTTCGCA GTTCGCCGTA TATGAACGCG
ACTATTCGTG AACTCACCGC GGATTTTGGT CTGGCCTCCG CCGTCATCAT CGCGAGCGTC
ACGGCGAAGC TGTCGAAGAT TTCGGGGCTG GAGCACTTAC AAATTTCAAA CAACTTTGAA
CCTTCTATGC AGCGCGATTG GTGGATTGAT TTGGGTTCAG GCGATAAGTT CATCCCCTTG
ATTGCAATCT TCCCAGCTCT CATGCTCACG GCGTTGTACT ACGTCGACAT GAACGTGGCG
ACATTGCTTT GCAACACGCC GCGCCTGAAG ATGCGTAAGG GCGCGGCTTA TCATTACAAC
TTTGCCGTGC TCGCAATATT GGTCTTCATC ACCTCGATGC TCGGACTGCC ACCTCCCACG
GGATCGCTGC CGCACTCGCC GCAGTACGTG TTGGCGCTCA GCGACGTAGA AGAGTACACC
GTGGACGGCG AGACGCGCAC GAAAGTCATC AAGGTGCATG AACAGCGACT CAGTCCGCTG
CTTGTCAACG TTCTCGTAGC TCTGAGCTTC GTCGTGATAC CCGCGCTAAA ATCAATCCCC
ATGAGTGTGC TCTTCGGATT GTTCATCTAC ACCGGCATCA TGGGATTGTA CGACAACCAT
TTCTGGGAGC GGATCACCAT CGCGTTCATG GAACCGCGCT TGCATCCGCC GACGTCGTAC
GTCAGGCACG TACCGCTCAG TCGCGTGCAC GCATTTACGT GCGTACAAAT CGCGTGTGTC
GGTGTGCTAT GGGGTATTCG AAGCTCGCCG ATCGCCTTGA CGTTTCCCAT CTTTATTTTA
GCGTTGATGC CGCTTCGCAT TTTACTGTTC AAGAAGTTCA ACATGTTTTC GCCGGAATGG
CTCGAACTCT TGGACGCAAA GGGCGCAAAA CCGTACGAGG TGGACGAAGA CAACCAAATC
ATGGAAGATG GTCGGGAGAA CAAATGGTTG TCCAACACCG GCACGGCGAG CGCTTCGAAT
TTCATGGAAT TCGCCGGCTT GCACGAATCC GGTCCCGCAT TCGGCAACGC GGCGTCCTTA
CACGCGCACA CGCGTTCCGA CGCGGATGCC ATGATAACAG CGCGAAATCG GATACCACTT
ACACCGCTTA CGAAATAA
|
|---|
| Protein sequence | MASKRGADFT GKFAGGIVSD FKRRWAVYKS DWVDGFKAPT KCLSATLFMY FACLGPAIAF
GGLAYKETDG HVGAMEYLCS QALSGIIWAV FSGQPEIVLR PAGPQTVFLI ELFKRCKAWR
IDFLVTSAWV GVWTGIFMLC IASFDACAWV ANKCTKFTQD IFSLFVCAIF IFEGFKNLFT
YFSDDKYSTA AALFSLMLGV MTLQLGLWAV HLRSSPYMNA TIRELTADFG LASAVIIASV
TAKLSKISGL EHLQISNNFE PSMQRDWWID LGSGDKFIPL IAIFPALMLT ALYYVDMNVA
TLLCNTPRLK MRKGAAYHYN FAVLAILVFI TSMLGLPPPT GSLPHSPQYV LALSDVEEYT
VDGETRTKVI KVHEQRLSPL LVNVLVALSF VVIPALKSIP MSVLFGLFIY TGIMGLYDNH
FWERITIAFM EPRLHPPTSY VRHVPLSRVH AFTCVQIACV GVLWGIRSSP IALTFPIFIL
ALMPLRILLF KKFNMFSPEW LELLDAKGAK PYEVDEDNQI MEDGRENKWL SNTGTASASN
FMEFAGLHES GPAFGNAASL HAHTRSDADA MITARNRIPL TPLTK
|
|---|
| |