| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38488 |
|---|
| Symbol | |
|---|
| ID | 5001935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 835555 |
|---|
| End bp | 837606 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640417356 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418124 |
|---|
| Protein GI | 145347325 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1239] Mg-chelatase subunit ChlI |
|---|
| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGA CGTTCCCGCT CGCGGCGGTG ATCGGGCAGG AAAAGATCAA GTCGGCGCTG
CTTTTGGGAG GGATCGACCC GACGTTGGGA GGGATCGCGA TCTCGGGACG ACGAGGAACG
GCGAAATCCA TCATGGCTCG CGGTTTGCAC GCGCTGTTAC CGCCGATCGA GTGCGTGAAG
GATTCGTATT GCAACGCCGA CCCGTCCAAG CCGGATGAGT GGGAGGAGGG GTTGAGCGAA
AAGGTAACGA GGAACGCCGA CGGGAACGTG GAGACGATCA TCCGCGACGC GCCGTTCGTG
CAGCTCCCGC TCGGAGTGAC GGAAGATCGT TTGATCGGTA CGGTCGACAT CGAAGAGTCC
ATGAAGCAAG GGAAGACGAT TTTCCAACCC GGGCTGTTGG CGCAGGCGCA CAGGGGCATC
CTTTATGTCG ACGAAATCAA CCTCCTCGAC GACGGGGTCG CCAACTTGTT GCTTTCCGTG
CTTGCCGAGG GTGAAAACGT CGTCGAGCGC GAAGGCATCA CGCTCAAGCA CCCGTGTAAG
CCGCTTTTGA TCGCGACGTT TAACCCGGAG GAGGGTAACC TTCGCGAGCA CCTGTTGGAC
CGCATCGCGG TGACGCTCTC GGCGGATCAG ATGTTGACAT TTGAGGACCG CGTCGAGGCG
GTTAGCCAAG CGATGAACTT CCAAAACGCG GCCGAAAACT CGGTGAAGAG CGTGGAAGAG
GCGACGGAAG GTATCAAGAC GAACATCATC TTGGCGCGCG AGTGGTTGAA GGATTGCACG
ATTTCGCAAG ATCAAGTCGA GTACTTGGTG CGCGAGTCCA TTCGCGGTCA GATTCAAGGT
CATCGCGCCG AACTTTTCGC CGTCAAGGCG GCCAAGGCAC TCGCCGCACT CGACGGTCGA
TCCAAGGTGA ACGCTGACGA CTTGAAGGAA GCCGTGCGAT TGGTTATCGT ACCGCGCTCT
GATATTTTGC AAGACGCGCC GCCGCCGGAT GAAGACGACA TGCAGGAACC GCCGCCGCCA
CCGCCGCCGC CGCAAGATAA CGCGGAAGAC GAAGACCAAG ATGAAGAGAA CGAGGAAGAG
AACGAGGAAG ACGAGGAAGA AGAGGACGAT ATTCCGGACG TTCCGGAGGA GTTCATCTTT
GACGCCGAGG GCGTCATCCT CGACAAGGAT GTGACTCAGT TCGCGCAACA AACCAACAGA
CAAGGCGGCC GCTCCGGTCG TTCGAAGAGC GTCATTTTCT CCACCGATCG TGGTCGCTAT
ATTAAGCCCA TTTTACCCAA GGGTAAGACG ATTCGTTTGG CGGTTGACGC GACGTTGCGC
GCCGCTGCTC CGTACCAAAG CGCTCGACGC GAGCGCGATC CCAACGCGGA GAAGAAGAAG
GTTTATGTCG AAAAGGGTGA CATGCGAGCG AAGAAGCTCG CGCGTAAATC CGGTGCATTG
GTCATTTTCC TCGTCGATGC CTCCGGTTCG ATGGCGTTGA ACAGAATGCA AGGCGCGAAG
GGCGCCGCAC TTTCAATCTT GGAAAGCTCG TACCAAAGCC GCGACATGGT GTCCATCGTC
CCTTTCCGAG GTGACGAAGC TGAAGTGCTC TTGCCGCCGT CGCGATCGAT CGCGATGGCG
AGAAACCGTC TCGACACCAT GGCGTGCGGT GGTGGTTCCC CCTTAGCGCA CGGGTTGTCC
GTCGCGGCGC GCGTCGGACT CAACGCCATG TCCACGGGAG ACGTCGGACG CGTCATGATT
GTGTGCCTCA CCGACGGTCG CGCCAACGTG TCCATCAACA AGTCGCAACG AGATCCGGAG
TATCTCGGCC CCGACGCCAA GAAGCCCACG AACGAAGAGC TCGAACAGGA AGTGGCTGAC
ACGGCGGCGA GAATCGGCGC CGCCGGTATG TCGGTGCTCG TCATTGACAC CGAAAACAAG
TTCCTTTCGT CTGGCACCGC CGAGAAGCTC GCCCAAAACG CCCAAGGCAA GTACTACTAC
TTGCCGAACG GTACCGAGAG AGAGATTGCG GCGGCGACGG CTTCGGCAAT GGCGGAAGCC
AAGTCGATTT AG
|
|---|
| Protein sequence | MRQTFPLAAV IGQEKIKSAL LLGGIDPTLG GIAISGRRGT AKSIMARGLH ALLPPIECVK
DSYCNADPSK PDEWEEGLSE KVTRNADGNV ETIIRDAPFV QLPLGVTEDR LIGTVDIEES
MKQGKTIFQP GLLAQAHRGI LYVDEINLLD DGVANLLLSV LAEGENVVER EGITLKHPCK
PLLIATFNPE EGNLREHLLD RIAVTLSADQ MLTFEDRVEA VSQAMNFQNA AENSVKSVEE
ATEGIKTNII LAREWLKDCT ISQDQVEYLV RESIRGQIQG HRAELFAVKA AKALAALDGR
SKVNADDLKE AVRLVIVPRS DILQDAPPPD EDDMQEPPPP PPPPQDNAED EDQDEENEEE
NEEDEEEEDD IPDVPEEFIF DAEGVILDKD VTQFAQQTNR QGGRSGRSKS VIFSTDRGRY
IKPILPKGKT IRLAVDATLR AAAPYQSARR ERDPNAEKKK VYVEKGDMRA KKLARKSGAL
VIFLVDASGS MALNRMQGAK GAALSILESS YQSRDMVSIV PFRGDEAEVL LPPSRSIAMA
RNRLDTMACG GGSPLAHGLS VAARVGLNAM STGDVGRVMI VCLTDGRANV SINKSQRDPE
YLGPDAKKPT NEELEQEVAD TAARIGAAGM SVLVIDTENK FLSSGTAEKL AQNAQGKYYY
LPNGTEREIA AATASAMAEA KSI
|
|---|
| |