Gene OSTLU_38480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_38480 
Symbol 
ID5002116 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp536233 
End bp537112 
Gene Length880 bp 
Protein Length251 aa 
Translation table 
GC content54% 
IMG OID640417537 
Productpredicted protein 
Protein accessionXP_001417803 
Protein GI145346660 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5046] Protein involved in Mod5 protein sorting 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0243935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0169856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC TCGTCGAGCC GGACGTGGCG GCGTTGAACG CGTTCCTGAC GAACGTGAAC 
GTCGGAGACT ACGTCGTGAG CGGACAGGTG GAGAGTTACA GCTGTGCGTG CGCGAAGCGA
GGCGAGGCGA GGGGACGCGC GAGCGCGAGG GGGCGAACGG GACGACGCGA CGGCGCGGGA
CGGGATGACT GACGATGGAA ACGCGAATGG ACGGTGATGT GATGCAGGTA AATTAGCGGG
CACTGATAAG AAATTGTCGC GCTCGCTCGA TGCGGAGGTG GTGACGGAGA TTGTGTCGAG
CTGCTCGCCG ACGAACCTGA GCACGTCGCC GGTGGGGCCG TTGACGGATC AAAACAGTCG
GAAGACGTTA ATTTATCTTA TACTGACTCT GAATCACATC TATCCGGATT ACGACTTCAG
TAGTTTGCGC GCGGAGCATT TCACCAAGGA AGGGACGCTG AGCGACGTGA AGACGGACAT
AGATACGTTG CTCATGGAGA GTAGTAAAGT TTGGGCGGCG CGGTACGGGA ACGAGGAGCC
TTTTCTCGAG GTTTTGTGGA AGACGATCGA TGCCGCGATC GAAGTGTTTG ATTGCGACGT
GTATTCTTAC AAAGCCGTGG CCGAGGGTGA TCCGTTCACA GACGACGGTA ATCTGTGGTC
GTTCAATTAC TTCTTCTACA ACAAAAAGCT GAAGAGAATT CTCTACTTCA CGATGCACGC
GACTTCAAAG ACGATGTTAG ACTTAGACTC CGACGACGAA CTCGACTTGG ACGAGTCGAA
TGACCAAACA GGCGGAACGG GGTACAATTC CTACGATGGA TCGTACCGAG AATCATTCGG
TAACGATGAC TCGATGGTCT TTGACGAGAT GGACCTATGA
 
Protein sequence
MKLLVEPDVA ALNAFLTNVN VGDYVVSGQV ESYSCKLAGT DKKLSRSLDA EVVTEIVSSC 
SPTNLSTSPV GPLTDQNSRK TLIYLILTLN HIYPDYDFSS LRAEHFTKEG TLSDVKTDID
TLLMESSKVW AARYGNEEPF LEVLWKTIDA AIEVFDCDVY SYKAVAEGDP FTDDGNLWSF
NYFFYNKKLK RILYFTMHAT SKTMLDLDSD DELDLDESND QTGGTGYNSY DGSYRESFGN
DDSMVFDEMD L