Gene OSTLU_38392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_38392 
Symbol 
ID5001949 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp834642 
End bp835250 
Gene Length609 bp 
Protein Length159 aa 
Translation table 
GC content54% 
IMG OID640417370 
Productpredicted protein 
Protein accessionXP_001418123 
Protein GI145347323 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA AGAAGAGCTC GCTGTCGAGC AGCTCGCGGC GAATCCAGAA AGAGTTGGCG 
GAAATATCGC TCGAACCGCC GACCAACTGC AGCGCGGGAC CGAAGGGGGA TAACTTGTAC
GAGTGGGTGT CGACCATCGT CGGTCCGAGC GGTACGTTTC GCGTGAAGGA TGAAGATTGT
TGCGCCCGTC AACCACCTGG TTGGGCATTT CAAAAAACGA GGACGCGAAC GACGCGCGGT
CGACTTACCA AACTCGCTCG GTTTCGCGCC GATCACGCAG GTTCGCCGTA TAATGGGGGT
GTATTTTTTC TCGACATTCA ATTCCCGACC GATTATCCAT TCAAGCCGCC CAAAGTGACG
TTCCGCACGC GAATCTATCA CTGCAACGTC AATAGCTCTG GACAAATTTG TTTGGACATT
TTGAAGGAAC AGTGGTCGCC CGCGCTGACA ATTTCCAAGG TTCTTCTGTC CATTTGCTCG
TTACTGACGG ATGCGAACCC GCACGATCCT CTCGTCGGCA GCATCGCGCA GCAGTTCTTG
CAAGATAAGG AAAATCACGA CAAGACGGCT CAAGAGTGGA CCAAGGTACG TTCGGCGGAG
CACGTCTGA
 
Protein sequence
MSDKKSSLSS SSRRIQKELA EISLEPPTNC SAGPKGDNLY EWVSTIVGPS GSPYNGGVFF 
LDIQFPTDYP FKPPKVTFRT RIYHCNVNSS GQICLDILKE QWSPALTISK VLLSICSLLT
DANPHDPLVG SIAQQFLQDK ENHDKTAQEW TKVRSAEHV