Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_38392 |
Symbol | |
ID | 5001949 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | - |
Start bp | 834642 |
End bp | 835250 |
Gene Length | 609 bp |
Protein Length | 159 aa |
Translation table | |
GC content | 54% |
IMG OID | 640417370 |
Product | predicted protein |
Protein accession | XP_001418123 |
Protein GI | 145347323 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA AGAAGAGCTC GCTGTCGAGC AGCTCGCGGC GAATCCAGAA AGAGTTGGCG GAAATATCGC TCGAACCGCC GACCAACTGC AGCGCGGGAC CGAAGGGGGA TAACTTGTAC GAGTGGGTGT CGACCATCGT CGGTCCGAGC GGTACGTTTC GCGTGAAGGA TGAAGATTGT TGCGCCCGTC AACCACCTGG TTGGGCATTT CAAAAAACGA GGACGCGAAC GACGCGCGGT CGACTTACCA AACTCGCTCG GTTTCGCGCC GATCACGCAG GTTCGCCGTA TAATGGGGGT GTATTTTTTC TCGACATTCA ATTCCCGACC GATTATCCAT TCAAGCCGCC CAAAGTGACG TTCCGCACGC GAATCTATCA CTGCAACGTC AATAGCTCTG GACAAATTTG TTTGGACATT TTGAAGGAAC AGTGGTCGCC CGCGCTGACA ATTTCCAAGG TTCTTCTGTC CATTTGCTCG TTACTGACGG ATGCGAACCC GCACGATCCT CTCGTCGGCA GCATCGCGCA GCAGTTCTTG CAAGATAAGG AAAATCACGA CAAGACGGCT CAAGAGTGGA CCAAGGTACG TTCGGCGGAG CACGTCTGA
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Protein sequence | MSDKKSSLSS SSRRIQKELA EISLEPPTNC SAGPKGDNLY EWVSTIVGPS GSPYNGGVFF LDIQFPTDYP FKPPKVTFRT RIYHCNVNSS GQICLDILKE QWSPALTISK VLLSICSLLT DANPHDPLVG SIAQQFLQDK ENHDKTAQEW TKVRSAEHV
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