| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31874 |
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| Symbol | |
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| ID | 5001998 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009359 |
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| Strand | - |
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| Start bp | 684984 |
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| End bp | 688354 |
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| Gene Length | 3371 bp |
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| Protein Length | 1060 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640417419 |
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| Product | predicted protein |
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| Protein accession | XP_001418083 |
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| Protein GI | 145347243 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.630707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGCGC GTCCGCGTCG GGACGCGCTG CGCGCGACGA CGGACATAGA ACCTTTAGAC
ACGGCCAGAG CGTTTGATTT CAAGTGCGTT CGCAACGGTC GCGCGGGAAC GACGGTGTCG
CGCGCGACGC GACGGACTGA CGCGAAGGCG TCGCGACGAC GCGCGCGTCG TAGGTATTTC
AACAGCATTC AGAGCGAGAT GCTCGAGTTT TTGGTGAACA CGCGACGGAG CTTCGTGATG
AGTGCGTGAC GCGACGCGAA CGCGAGACGC GCGGCGAGTG CCTCGTTTTG GAAAGGACTG
ACGAATGAAC GCGTGATCGC GCGTCGAACG CGAACGCAGG CGCGCCGACG GGGAGCGGGA
AAACGACGGT GTTTGAGTTG GCGATGTTGG CGGCGTTGCG AGGACCGAAC GCGACGGAGG
GGGGATTGAG CGCGGCGCGA GGGCGGAGAA AGGTGATTTA TCTCGCGCCG AGTCGGGCTT
TGGTGAGCGA AAAGGCGCGC GAATGGCGAG AACGATTAGG CCGGATCGGA ATCACGTTTG
CGGAGTTGAC GGGAGATAAC GATTTTGGTG GGGACGTGTG GGGGGAGATT GAGAATGTCG
ATGCGATTTT GGCCACGCCG GAAAAATTCG ACCGCGTGAC TCGTCTGGAC GCGAACCGCG
GCGGGATGTC GTTCTTCAGC GACGTCGCCG CGGTGTTGAT TGATGAAGTG CATCTCATCG
GTGACATTCG TGGAGGGTGT TTGGAAGCCA TTGTTAGTCG TTTAAAGTTG CTGAGCAAGT
CGTCGGCTCT ATTGCAATCG CACTTGCGAA ACGTTCGCTT TGGCGCCGTG AGTGCGACGA
TTCCGAACAT TGAAAACCTC GCGAATTGGC TCGGCGCCAA TCGCGATGGC ACGTTTGTGT
TCGGTGAAGA GTTTCGACCT GTCAAGTTAC AGACGTACGT GCGCAGTTTT CCGGACACAA
CGAGCGATTT TTTATTCAAC AAGTATCTCA AGCAAAAAGT GTTTGCGGTG ATTCGGGAAT
TCTATCGCGG CAAGCAGACG CTCGTGTTTT TGGGCAGTCG CAATGACGCG CAGCAGACGG
CGAAGCAGCT CGTGGTGGAC TCTCGTAGAC AGTTCGTAAA CCCACAACTC TCCCAATTCT
TGCTCGAAGC GTCCATGCAA GCGCAGAACA AACATCTTGC TGAGTGTATC ACCGCCGGCG
TAGCGTTTCA TCACGCCGGG CTGGAACGAG GCGATCGCGA GTTGGTCGAG GGATTGTTTT
GCTCTCGCGC TATTATGGTT TTGTGCAGTA CGAGCACTTT AGCTGTGGGC GTTAATCTTC
CAGCGTACTT GTGCGTCGTC GCTGGTACGG ATATTTACGA CGGTGGTGGC GCGTACAAGG
AAATATCCAT GGACACCCTA CTTCAGATGA TCGGCCGCGC GGGGCGACCT CAATTCGACA
CCGAGGGCGT GGCGGTGGTG ATGACGAAGA ACTCTTTGCG ATCGCGCTAC GAGGGATTAG
TTCATGGCAA GTATCCGCTC GAGTCAAGTC TCGGTTCATC GCTGCCTGAG TACTTAAACG
CTGAAATAAG CTGTCGAACT GTGAACACGG TGGACGACGT CCTGGAGTGG GTGCAAAGCA
CGTATTACTA TATTCGCGTT TGCGCGGAAC CAAGAAAGTA CGGAATTAAG AACGATGATA
CGGTGACAGA ACACGTGAAG CGGTTAATCA AGGCGACTTT GGATGAGCTT ATTGCGTCAG
GAATGTGCGC CGTGGTAGGA AATAGCGCGC TTCAACCGCT CAAAGCCGGA GACATCATGT
CTCTTCGTTA TTTGCGCTTC AAAACGATGA AGAACATCAT GCGAAACGTC GCGACACCGT
CGTACGCGGA TCTTTTAAGA ATGTTGTGTG AGAGTTACGA GTTCAAAGAC ATCAAGCTTC
GCCGAGATGA AAGGAAGTTG TTGAAGCAGT TGAACACAGA TCAAAAGATT ATTCGCTTTC
CCGTGCAAGA GACTACTGGA AAGTCGCAAA AGTTGTCCTT AGCGAAGGTA ATTCGTACGC
CGGGCGAAAA GCTGTATCTT TTGGCGCAGT ATATTTTAAC TGACGTGGTC GAACCGAGCA
TCACGCTCTC GCATCCGTCG ATGCGAATGG AAGGTGATAA AGTTCTTCAG CTCGGAACTC
GCATCATGCG CGCGGCGTCA GAGTACTATC AATCCACGTT GACGTTTACC GCTGCAGCGA
ACGCCTTTTC GCTCGCCAAA GGTCTCGACG TGCACATGTG GCCGGACACG AAAGTGCAAA
TTCGACAGCT CAAGCACTCG CGCATGAAAA AAGTTATCGA AAAGCTCATT GAAGCTAGAA
TTATGACGCT CGAAGACGTT GAAGACGCAG ATCCGCGTCG CATCGAAATG AAGCTCGGCA
AGTCGTTTCC GTTTGGCAAC ACCCTTCAAG GTGACGTAAA GGATTTTCCA TCCGAGCTCA
AGGTTGAAAT GACGCATCAC GCCATGTCGA AGGAGTCCTA CAGCGTCGAC GTCAAGCTGT
CGTTTAAGAA TACTTCTGAG AGCCGCTTGA GCACGAATCA TCTACCGGCA AAATATCCGG
GGATGCTCTT CATCGGCTCA GAGCACGACG ACCGGTTGTT GTACGTTCAG CGTTTGCCGA
CGCGAGAGTT TGATTTGGAT GCTAACATGG ACGCATCCGC GAACATCGTC TTCCACGGCC
GGTTCACGTG TACGAACGTG TCGAGCGGAA ACGTCCCGCT TTGTTTCGTG GCGCGTGTGA
TTTTCGAACG TTGCATCGGT CGCGACGTCG TCGAATACCA CGTTGTCAAT CGCGGCGGCG
CGAGTCCGCG AACTCCGGAC AAATCAGGTG TTTCTCCCGC GAAGTCGCCC ACGTCGACGA
CGCCCGCGTC AACGATGAAA CAAACAAAGA TTATCGCTGA CGCGCACACC AAAAAATTCA
GACTGATGAA TTCGGACGAC GAAGTTCGCC GGAAGGTGGC ATTCGAAGAC TTTAAGCTGT
CTAACGAATC GTCGCCGAAC TCGAGTCCGC GTGAACGCAA AGCTACGTCG CGTTCAGAAG
ATGTTTGCAA TAGGTGCGGT GTCAAAGGCC ATTGGGCAAA GGACTGCTTA TATCCCGACA
ATCGACCCGA AGAGCTGCGA CCAGGGCCGA AACCGACGGA CAAATGTCGT AGATGCGGTG
AGCTTGGGCA CTTCGCTCGC GATTGTTCGT TCGACGAGGA CACATGCAAA ATTTGTCAGC
AGCACGGCCA TCGGGCTCGA GATTGTCCAA GCGTGGCCGA CGTCTTTGCT TCGCTTGACG
ACACGACAAC GACGGTGAAC GACGCATCCG ATTCGGACAA GGAAGAAAAC TGGGAGTTCG
TCTTTGGTTG A
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| Protein sequence | MYARPRRDAL RATTDIEPLD TARAFDFKYF NSIQSEMLEF LVNTRRSFVM SAPTGSGKTT
VFELAMLAAL RGPNATEGGL SAARGRRKVI YLAPSRALVS EKAREWRERL GRIGITFAEL
TGDNDFGGDV WGEIENVDAI LATPEKFDRV TRLDANRGGM SFFSDVAAVL IDEVHLIGDI
RGGCLEAIVS RLKLLSKSSA LLQSHLRNVR FGAVSATIPN IENLANWLGA NRDGTFVFGE
EFRPVKLQTY VRSFPDTTSD FLFNKYLKQK VFAVIREFYR GKQTLVFLGS RNDAQQTAKQ
LVVDSRRQFV NPQLSQFLLE ASMQAQNKHL AECITAGVAF HHAGLERGDR ELVEGLFCSR
AIMVLCSTST LAVGVNLPAY LCVVAGTDIY DGGGAYKEIS MDTLLQMIGR AGRPQFDTEG
VAVVMTKNSL RSRYEGLVHG KYPLESSLGS SLPEYLNAEI SCRTVNTVDD VLEWVQSTYY
YIRVCAEPRK YGIKNDDTVT EHVKRLIKAT LDELIASGMC AVVGNSALQP LKAGDIMSLR
YLRFKTMKNI MRNVATPSYA DLLRMLCESY EFKDIKLRRD ERKLLKQLNT DQKIIRFPVQ
ETTGKSQKLS LAKVIRTPGE KLYLLAQYIL TDVVEPSITL SHPSMRMEGD KVLQLGTRIM
RAASEYYQST LTFTAAANAF SLAKGLDVHM WPDTKVQIRQ LKHSRMKKVI EKLIEARIMT
LEDVEDADPR RIEMKLGKSF PFGNTLQGDV KDFPSELKVE MTHHAMSKES YSVDVKLSFK
NTSESRLSTN HLPAKYPGML FIGSEHDDRL LYVQRLPTRE FDLDANMDAS ANIVFHGRFT
CTNVSSGNVP LCFVARVIFE RCIGRDVVEY HVVNRGGASP RTPDKSGVSP AKSPTSTTPA
STMKQTKIIA DAHTKKFRLM NSDDEVRRKV AFEDFKLSNE SSPNSSPRER KATSRSEDVC
NRCGVKGHWA KDCLYPDNRP EELRPGPKPT DKCRRCGELG HFARDCSFDE DTCKICQQHG
HRARDCPSVA DVFASLDDTT TTVNDASDSD KEENWEFVFG
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