Gene OSTLU_31651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_31651 
Symbol 
ID5001852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp293332 
End bp294100 
Gene Length769 bp 
Protein Length190 aa 
Translation table 
GC content60% 
IMG OID640417273 
Productpredicted protein 
Protein accessionXP_001417729 
Protein GI145346509 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0386073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.188387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCGCGCGCGC CGCGCGATCG CGCTCGAGTT CGGACTCGCG CGGTCGATTT CATCCATCGG 
ACGCGCTCGC TCGCGCGTCT CCCGTCGCTC GACGCGCGGC GCTCGCGCGT CGGCACCGCG
CACCAGTCGC CGGGGGAACT TTCGAAAGCG TCGACAGCTG ACGGCTATTT CGCCACGCAC
GCGCGCGCTC GACGTCATGG GCGAGAATCT CTCGCCCGAA ACCGTCAATA GCATCATGCG
TCAACTGAAA GATTTGATGC AGAGCCCCGC GGAGGGGATC AGGGTGCGAG TGAACGAGGA
GAACGTGACG GATGTCTTCG CCGAGCTCGA CGGTCCCGCG GACACGCCGT TCGAAGGCGG
GACGTTTAAG ATGAAGCTCG CGCTGCCGGC GGATTACCCG AACAATCCGC CGAAGGGATT
CTTTACGACA AAAATATTTC ATCCGAATAT TCGTCAGCCG AGCGGGGAGA TTTGTGTGAA
CACGCTCAAG CGTGACTGGC AACCGACGCA CGGACTGCGG CACATATTGA TGGTGATTCG
ATGCTTGCTC ATAGAACCGT TTCCGGAGAG CGCTCTGAAC GAAGAGGCTG GAAAGCTTTT
ACTCGAGGAT TACGAAGAGT ATTTTAGGCG CGCGAAGATG TACACCAATA TTCACGCCAA
ACCCGAAACG GGCAAGGCGG AGGACGCGGC GAGCGCGTCG GCGGCGAGCG GCGGGGAGAA
GAAGTTGGAC AAAAAGAAGG ACAAGAAGAA GAGCTTGCGC CGTCTTTAG
 
Protein sequence
MGENLSPETV NSIMRQLKDL MQSPAEGIRV RVNEENVTDV FAELDGPADT PFEGGTFKMK 
LALPADYPNN PPKGFFTTKI FHPNIRQPSG EICVNTLKRD WQPTHGLRHI LMVIRCLLIE
PFPESALNEE AGKLLLEDYE EYFRRAKMYT NIHAKPETGK AEDAASASAA SGGEKKLDKK
KDKKKSLRRL