Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_31651 |
Symbol | |
ID | 5001852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | + |
Start bp | 293332 |
End bp | 294100 |
Gene Length | 769 bp |
Protein Length | 190 aa |
Translation table | |
GC content | 60% |
IMG OID | 640417273 |
Product | predicted protein |
Protein accession | XP_001417729 |
Protein GI | 145346509 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0386073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.188387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCGCGCGCGC CGCGCGATCG CGCTCGAGTT CGGACTCGCG CGGTCGATTT CATCCATCGG ACGCGCTCGC TCGCGCGTCT CCCGTCGCTC GACGCGCGGC GCTCGCGCGT CGGCACCGCG CACCAGTCGC CGGGGGAACT TTCGAAAGCG TCGACAGCTG ACGGCTATTT CGCCACGCAC GCGCGCGCTC GACGTCATGG GCGAGAATCT CTCGCCCGAA ACCGTCAATA GCATCATGCG TCAACTGAAA GATTTGATGC AGAGCCCCGC GGAGGGGATC AGGGTGCGAG TGAACGAGGA GAACGTGACG GATGTCTTCG CCGAGCTCGA CGGTCCCGCG GACACGCCGT TCGAAGGCGG GACGTTTAAG ATGAAGCTCG CGCTGCCGGC GGATTACCCG AACAATCCGC CGAAGGGATT CTTTACGACA AAAATATTTC ATCCGAATAT TCGTCAGCCG AGCGGGGAGA TTTGTGTGAA CACGCTCAAG CGTGACTGGC AACCGACGCA CGGACTGCGG CACATATTGA TGGTGATTCG ATGCTTGCTC ATAGAACCGT TTCCGGAGAG CGCTCTGAAC GAAGAGGCTG GAAAGCTTTT ACTCGAGGAT TACGAAGAGT ATTTTAGGCG CGCGAAGATG TACACCAATA TTCACGCCAA ACCCGAAACG GGCAAGGCGG AGGACGCGGC GAGCGCGTCG GCGGCGAGCG GCGGGGAGAA GAAGTTGGAC AAAAAGAAGG ACAAGAAGAA GAGCTTGCGC CGTCTTTAG
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Protein sequence | MGENLSPETV NSIMRQLKDL MQSPAEGIRV RVNEENVTDV FAELDGPADT PFEGGTFKMK LALPADYPNN PPKGFFTTKI FHPNIRQPSG EICVNTLKRD WQPTHGLRHI LMVIRCLLIE PFPESALNEE AGKLLLEDYE EYFRRAKMYT NIHAKPETGK AEDAASASAA SGGEKKLDKK KDKKKSLRRL
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