| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31611 |
|---|
| Symbol | |
|---|
| ID | 5001695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 226619 |
|---|
| End bp | 228037 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 640417116 |
|---|
| Product | VIC family transporter: potassium ion channel subfamily H |
|---|
| Protein accession | XP_001417956 |
|---|
| Protein GI | 145346976 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0596506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00581537 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCA TTGAACCGTT TGTCATAGCG TTTGATTACC CGATGAAGCT CAAAGGGAGA
GGGTTGAGTG CTGCGCCGAT TATCGATTTC GTCGCAGGAG CGCTCTTCTT CATCGATACG
TTTGTGGTCA ACTTCTTAGA AGCCAAAGTT TTGACGTGTC GCTCCACGGG GCGACGGAAG
CTCATCACGA CTCCCAGACT CATCCGTAAG ATATACATCC TTGAAGGTTC ATTTGTCACG
GACGTGATAG TGAGCGTCCC GTTTGTCGTG CAAATAATCG CCTCGATTAA AGGCGAATCC
ACACCGGTGG AACGCCTAAC GAGAATTCTA CGTCTTTTGC GAGTTCTTCG AGTGACTGGT
TCATCGTTGA CGACGCCGGA GATTTTGTTC ATGAAGCTGT TTCGTATGAC TCCGATGGTG
ATATTCATCG CGCAGACGCT GCTCGTGTTT GCGCTTTTGG TCCATTCTGT GGCGTGCGTC
TACATCTTCG TTGCGATTCA GGAAGGCCGT AATCAAAGCT GGCTCACGCA GGCGGACTTG
GCAGATGGGT CAAACTCCGA AATCTACATC GTTGCACTAT ATTTTGCCAC TGCCACGATC
ACGACCGTCG GTTTTGGCGA CATCTCTGCG GGATCGAATG ACCTCGAGCG TTGCATATCG
ACCGTAGCGA TGATCGTGGG CGCGATCTTC TTCGCCTATC TCGTTGGGAG CATGGGAGCA
TCGATTCAGG CACTTTCAAC AACGATGTCG CGACAGCGCA AATTTCGAGA ACGCGTGACG
CGTGTGCACG CATTTCTCGA TCGGCAACAC GCACCGACGC ACATCAGGAG GCACATCATG
TCGTTCATTT CAGAAGTCGA GCCACGGCGC ACGTTCCTAC GAGAAAACGA AGAAATCATG
AAGTCATTGC CGACTGATTT AATGGCGTCC ATGGCGCACC ACATGCTCGC GCCGAACGTT
GGTCGAATAT TCGGGAACGT CTCGAACGGC CTTTGTCAGC ACATCGTGAG TGTATTCGAG
CTAGTCGTCA TCGAGCCTGG AATGGTCATA GATTCTGGTT ACTTTTACGT CGTCACCGAA
GGAGTCGTGG CAATTTCAAG TCCCAACGAG CGCAAAATGA TCGCTGTTCT CACTGGGCAA
GCCGATGCGT ACTTGTGCTA CTTTGGATTG GACGAACTCA TTCCACCCGA ACGAAGAAAA
TCAGTCCGCG CTTCGGCGCT CACCGTGTGC GAACTCTGGC GCGCGCGCGC ATCGGCCATC
GAAGAAATCT TCAAGTCTCA CCCGTTCTTG GCGCAGATAA TGTTAGAGAA AATTCGATCC
CTCGAAGACG ACGAGTTTAG CGAATTGCTC GCCTATCGAG TTTTCATTCT GGAGTCTTTT
TTAGCGCGCT TTGTCGCCAT GCGCGAGAGT GGTGAGTGA
|
|---|
| Protein sequence | MSVIEPFVIA FDYPMKLKGR GLSAAPIIDF VAGALFFIDT FVVNFLEAKV LTCRSTGRRK
LITTPRLIRK IYILEGSFVT DVIVSVPFVV QIIASIKGES TPVERLTRIL RLLRVLRVTG
SSLTTPEILF MKLFRMTPMV IFIAQTLLVF ALLVHSVACV YIFVAIQEGR NQSWLTQADL
ADGSNSEIYI VALYFATATI TTVGFGDISA GSNDLERCIS TVAMIVGAIF FAYLVGSMGA
SIQALSTTMS RQRKFRERVT RVHAFLDRQH APTHIRRHIM SFISEVEPRR TFLRENEEIM
KSLPTDLMAS MAHHMLAPNV GRIFGNVSNG LCQHIVSVFE LVVIEPGMVI DSGYFYVVTE
GVVAISSPNE RKMIAVLTGQ ADAYLCYFGL DELIPPERRK SVRASALTVC ELWRARASAI
EEIFKSHPFL AQIMLEKIRS LEDDEFSELL AYRVFILESF LARFVAMRES GE
|
|---|
| |