| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31494 |
|---|
| Symbol | |
|---|
| ID | 5002094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | + |
|---|
| Start bp | 49524 |
|---|
| End bp | 50055 |
|---|
| Gene Length | 532 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 640417515 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417655 |
|---|
| Protein GI | 145346356 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5120] Membrane protein involved in Golgi transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.322048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATA GAAAAAGTGC GCGCGATGAC GAGCGATGAT GGCGACGACG CGACGACGCG
ACGCGCGCGA GGGAACGACG CGACGACGCG AGGACTGACG GCGACGACGA CGGGACGAAT
TGCATCGTTT GTAGAAATCG GTATCGGGTT GACGAGCTTT GGATGCGGAT TCACCGCGCT
CGGGGTGGTG TTTTTCTTCG ACCGAGGGTT GTTAGCGATG GGGAATCTGA TGTTCCTGTC
GGGGGTCACG CTCACGATCG GGCCGAAGCA GACGGTGAAG TTTTTCGTGA GGCCGAGGAA
CCAACGCGGG GCGTTTTGTT TTCTCTTCGG GCTGGCGTTG GTGCTGTACG GGTGGCCGTT
TATCGGGTTA TTGGTGGAAG GGTACGGGTT TGTGGCGCTG TTTAGTGCGT TCTTCCCGAC
GGTTTTGATA TTTTTAAAGA GGGTTCCGGT GTTGGGGTCG TTTCTGTCGC TTCCGGGCGT
GAAACACGTG ACGACGAGCA TCATAGGAAA ATCGCAAACG CTGCCGGTGT GA
|
|---|
| Protein sequence | MDDRKKIGIG LTSFGCGFTA LGVVFFFDRG LLAMGNLMFL SGVTLTIGPK QTVKFFVRPR
NQRGAFCFLF GLALVLYGWP FIGLLVEGYG FVALFSAFFP TVLIFLKRVP VLGSFLSLPG
VKHVTTSIIG KSQTLPV
|
|---|
| |