Gene OSTLU_24489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_24489 
Symbol 
ID5002057 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp18463 
End bp19885 
Gene Length1423 bp 
Protein Length357 aa 
Translation table 
GC content59% 
IMG OID640417478 
Productpredicted protein 
Protein accessionXP_001417891 
Protein GI145346842 
COG category[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5391] Phox homology (PX) domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGTCATCT CGGTGCGTCC GACGACGACG ACGACGATGA CGACGCCGAC GACGACGACG 
ACCGCGGCGT CGGACGAGCG CGCGGCGTTC CTGACGCCCG GCCCTCGACC GACGACGCCG
AGCGACGTGG GCGCGATTCG CGTGCCGACG GGATACGCGA CGCGCGCGAG CGCGGACGCG
GACGACGACG ACGACGACGC GGGACTTGTG ATCGAGATCG GAGATCCGCA CCGCGTGGGC
GACGGCCTGA GCAAGCACAT CGAGTACAAG GTGACGTACT GGACGGACAG CGCGACGTAC
GGTGGGAAAG ATTCGAGCGG GTGTTCGACG CGGCGATTTT CAGATTTCGA GTGGTTGAGC
AAACAACTCG GGGCGAATTG CGACGGAGTC ATCATCCCGC TGTTGCCGTC GAAGACGATC
TTACACATGG ACGACCCGTC GTCGCGCGGG ATCGAGCGAA GACGAAAAGG ATTAGCCGCG
TTCATGGCGA GGTGCGCGGC GCACCCGCTG GTGAGAAAAT CCGCCGACTT GCACGCGTTC
TTAACGCAAG ACTCAAAGTC TTGGACGCAG CGCGTGCCGT GGTACGAACG CGGCGTCTTG
AGCGAAGGCG TCTCATCGGT GACTTCGTGG TTGTCAACGC TGAACACGTC GGACATGAAG
TCCCTGACTT CGTCGATGTC CGTCGACGTC ATGCGCGAAA AGCAACAACA CGTCGACGTC
GTCGAATACG TGACCAAACT GAAACTGCGT TTGGAAAAGC TCATAGCGGC GACGAGCGCG
TTGCAAAAGC ATGGCGCACA CACGGTGAGC GCGTACGAGG AGTTCAACGC GTGCTTGGAG
CTTTTGGCGG GACAAGAGGA GAAGGCTCGT TCCGTTTTCG CCCAGTCGGG GGCCAAGGGC
GTGTGGTGGC AAAGACTCAG CGATTTATTC ACTGCGCTCA TTCCTCCGCA GAGACAGGCG
TCGGAATTGA TGTCGTCGGA GTTCTTAGAT TCCCTCAACG AAGTTCACGC GTTGTGCACC
GCCGTAGTGG CGGCATTCGA CGCGAGAAAG CGTGTCGTCG ATCACTACAA CAAGGTGTCG
TCTAGCATCG AACGAATCGA GAGTAAGCTA TCCACCATGG GTGTCCCAGA GCCTGGGCCG
AAGAGAGAAG AAAAACAAAA GATAGAACTC GCGGTGAGTG ACTTGCGAAT CGAACGAACG
CAGACGCACG AGAGATACGA GCGTTGCTGC GCGAACATGG AACACGAGTT GCTTTGGTTC
CACACCGAGT TGGCGTTGGT TCTCGGGCAA GCCCTGAAGA AACACGTCGC CGCGCAAGGG
GCGGCGGCTG GCAATCTATC GAGAGTTCAG GATTCGCACT TTATGGACAT TAAGGCGATG
ATGGCGAACA AGCCGCAGGC ATTCGTAGGG TGATGAAGCG AAA
 
Protein sequence
MTTPTTTTTA ASDERAAFLT PGPRPTTPSD VGAIRVPTGY ATRASADADD DDDDAGLVIE 
IGDPHRVGDG LSKHIEYKVT YWTDSATYGG KDSSGCSTRR FSDFEWLSKQ LGANCDGVII
PLLPSKTILH MDDPSSRGIE RRRKGLAAFM ARCAAHPLVR KSADLHAFLT QDSKSWTQRV
PWYERGVLSE GVSSVTSWLS TLNTSDMKSL TSSMSVDVMR EKQQHVDVVE YVTKLKLRLE
KLIAATSALQ KHGAHTVSAY EEFNACLELL AGQEEKARSV FAQSGAKGVW WQRLSDLFTA
LIPPQRQASE LMSSEFLDSL NEVHALCTAV VAAFDARKRV VDHYNKSLGR REKKNKR