| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_1571 |
|---|
| Symbol | |
|---|
| ID | 5002038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 264375 |
|---|
| End bp | 266114 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640417459 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417971 |
|---|
| Protein GI | 145347006 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.412513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GAGACGTACC CAGAGCTCGC GCCGGGGATC GGGAGCATAC GGACGAGGCA CGTGAATCGA
ATGTGGTGCG TGGAGGGCGT GGCGGTGCGC GTGGGATCGG CGAAGTCGCT GGAGGCGGAA
CAGGTGTTTG AATGCGTCAA GTGCGGACAT CAGTTTTTGA TTCCGGTGAA CGTGGAGGAG
GGAAGTGGTG GTGAACCCCC ACCCGCGTGT CCGCGAACGA AGCCGTGCAA GGGGAAATCG
TTTCGATCGG TGCCGGCGGC GCGCCGAATG GTTCGCGATT ATCAAGAGAT TCGGATTCAA
GAGCCCGTCG GTGGTCCAGC GGGCGGGAGC GCGCGCGCGG CGCCGCGCGC GTTGCTCATT
GTTTTAGAAG ATGATTTAGT TGACAAAGTT CAGGCGGGTG ATGACGTGAA GATGGCAGTT
GTCGTGCGAC GCCGCTGGTA CAAATGCGCT CGCGAGCAGC GATGCGAAGT CGAGCTCGTC
GGGCACTGCG TTAGTCTGCA CGTCAAACAA AAGCAGCAAA CAGTTGAACG AATCGTGGAC
GATGTAGAAA GTGCTGCGTT TGCTGCGTTT TGGCGCGAAC ACGAATCAAA ACCATTTTAT
GCGCGAGATA TGATTTTGCG CGCCATGTGT CCGCAGCTCT TTGGCATGGC GACGCCAAAG
CTTGCGCTGA TGCTGGCGCT CATAGGTGGA GTTCCCAGGC GAGATTCGAG TGGTGGACGC
GTGCGCGGCG AGTCGCACAT TCTTCTCGTC GGTGACCCTG GCATGGGCAA ATCGCAGCTT
TTGAAATATG CCGCCGCCGT CGCGCCGCGA GCGATTATGA CCACGGGTAT GGGCTCGAGC
GCTGCCGGTC TCACCGTCGC CGCTACGAAA GAGTCGGGAG AATGGGCGCT GGAAGCCGGC
GCGTTGGTCC TGGCAGATGG TGGAGTGTGC TGCATAGACG AGTTCGACTC TATTCGCGAA
GCCGAGCGGG CGACGATACA CGAAGCGATG GAGCAACAGA CGCTGAGCGT CGCCAAGGCG
GGCATGGTGA CGACGCTTCG CACGCGCACC ACGGTAATCG GAGCGACGAA CCCGAAAGGT
GGGCAATTCG ATATGGGATC GAGTCTCGCA GTGAACACAG GATTAGCGCC ACCATTATTG
AGCAGATTCG ATTGCTTGAT CGTGTTACGA GACGATCGTA AACCGTCATG GGATCGTGCG
GTGAGCGCGC ACATTTTGGA AACGCACGCT CGATTGGGCG CGATTGAGGA CGATTTACCG
TCGGGTACGC AAAGTTCCGA TGGGCGCGGT CGTTCGTCGT TGTCGTCCTC CGTCGCGACG
CAGCCAGGGA GCTCTCAACT CTCCGATGGC GTGCGATGGG GACGCGCGCT CGAAAAGTGG
GGTGCTGTTC CACAGGCTGC AGAGGAGGTG GCGGACGACG TCGCCGGCGA GATCCCGGCG
AAGCGAACGA AGCGTTTGCA AGACGCGAGC GTGGCGGCGT GGCCGTTCGA CCGTCTTCGG
CGCTACATCG CGCACGTGAA GAATGTGTTT CAGCCACAAC TCACAAGCGA TGCCGAACGT
CTGCTCACCG CGTACTACCA GGCGCAAAGG CGCCTGGAAG GTCGCAGCGT CGCTCGAACG
ACGATTCGCA TGCTCGAATC GCTCATTCGG TTGACGCAGG CGCACGCGCG ACTCATGTAC
CGTGACGTCG CGACGCGGCT CGACGCCACG GTCGCAGTGT GCTTAGTGGA AGCATCCATG
|
|---|
| Protein sequence | ETYPELAPGI GSIRTRHVNR MWCVEGVAVR VGSAKSLEAE QVFECVKCGH QFLIPVNVEE
GSGGEPPPAC PRTKPCKGKS FRSVPAARRM VRDYQEIRIQ EPVGGPAGGS ARAAPRALLI
VLEDDLVDKV QAGDDVKMAV VVRRRWYKCA REQRCEVELV GHCVSLHVKQ KQQTVERIVD
DVESAAFAAF WREHESKPFY ARDMILRAMC PQLFGMATPK LALMLALIGG VPRRDSSGGR
VRGESHILLV GDPGMGKSQL LKYAAAVAPR AIMTTGMGSS AAGLTVAATK ESGEWALEAG
ALVLADGGVC CIDEFDSIRE AERATIHEAM EQQTLSVAKA GMVTTLRTRT TVIGATNPKG
GQFDMGSNDR KPSWDRAVSA HILETHARLG AIEDDLPVAA WPFDRLRRYI AHVKNVFQPQ
LTSDAERLLT AYYQAQRRLE GRSVARTTIR MLESLIRLTQ AHARLMYRDV ATRLDATVAV
CLVEASM
|
|---|
| |