| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_15581 |
|---|
| Symbol | GTE3502 |
|---|
| ID | 5002026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 769870 |
|---|
| End bp | 772449 |
|---|
| Gene Length | 2580 bp |
|---|
| Protein Length | 859 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640417447 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418103 |
|---|
| Protein GI | 145347283 |
|---|
| COG category | [B] Chromatin structure and dynamics
[K] Transcription |
|---|
| COG ID | [COG5076] Transcription factor involved in chromatin remodeling, contains bromodomain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.251833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG TGGCGGCGGC GGCGACGGCG CCAGCGGGGG CGGCGGATGG GGAAAAACCA
GACGCGCGCG CGACGGAGGC GGGAGATGGG GCGATGACGG ACGCGCCGAA TACGCCCGCG
GAGGATGGGG CGATCACGGA GGCGGCGGCG GCCGCGGGTG CGAACGCGGC GGCGGCGACG
TGGCCGGCGA ACGCGGTGTC GGCGGCCCGC GGGGAGATCT TGTTGACGCT GAATCAGTCG
ATGAAGGCGC CGAAAGGGTA CGCGTACATG CCGGCGGGTG ATTACGCGGC GTTTGACTCG
AATTGGTTGG AGAGTAAGAA ACGCGTGCGT AGACCGTCGG CCAAGGTAGA TGACGGGATG
TTCGCGTCGG GCGACGACGA GGGCGGCGGG ATGTTTGCGG CGCCGGGCGA CGATTCGGCA
AAGCTTCCAG AAAAACCGGA CGAAGAGTGT ACGGAAGAGG AGCTTGCTTT GCGGAAGCTG
CAACGCAAAG AGCAAAAGCG TCGTAAGAAG GAAGAGTTGG CGAAGCGTCT CGCGGCCATC
GAGGAGGCCA AGACCAAGGT GGCGGAAATC GAGGCGAAGA AGCAGTTACA ATTCGCCAGG
TTACCTCCGC CGCGTCCGGC GTCGGCGCGA CCGATCAAGG CGACGCAACC GTACGATGGT
TACGGCGTCT CGTCCTACGG GTCGAAGAAG AAGGGCTCCG CGGCAAATCT TGCGGGCGTC
AAGAAGTTAA GGGATGGCCG CGCTGTCACG ACGCAGCGTT TGCAAAAGGA GTACGAAGTT
GAGCAGGCGC GCGACGCTCG ACGCAAGGAA ATGATAAGAC GTTGCCGTGA AGTTTTAATA
GCGTCGAAGA AGCACAAGTA TCACAAGATT TTCCTTGTGC CGGTCGACCC GAAAAAGCAT
GGGGTGCCAG ACTACTTTGA CATCATCAAG AACCCGATGG ATATGGGCAC GGTGAAGACG
AAGCTCGACA CCAAGGCATA TCTCAACCCC GCTGAGTTTT GCGCCGACAT GCGCTTAATC
TTCTCCAACG GCCTTCTGTA CAACGGCACG GCGTCAGATG CTGGCGTCAT GACTGAAACC
GTCCGCCAGT TATTCGAAAC CGCGTGGTTG AATAGCGATC TCGAAGACTA CGTCTCAATC
GAAAACGAAA TTCGAGAGCA CGAGGACATT GAAATTCGCA ACACGCCCGC CACGCCCATC
AGTCTTGAGG TGGCTGTCCT CGAAGACGCT AGAGCGGAAC TCGAAAAGGT CAGACGCGAG
ATTGAGGAAC TGAAGCGCGC CAAGCAAGAA GTTATATACA AGGAAGACGA CGAAGATGAT
TGGGACGACG AACCGATGCC GCGACCAAAG TCTCGGTCTC GCGGGGCGGT CAAAAGACAA
AGAGACCCAG ATGAAGATCC CGACTTCGAC TTCGATGACG CGCGCATGGA TGAAGACACT
TACAAGGAGT ACAAGGAGGA AGGCCGGATT CGAAAGGAAA TCAAGCGAGA GCGTGGATTC
AGGAGCGAAG GAGGCTACTC GCGTCCGCGA CCGGCGCCGA CGCCCTCGCG CGATATGACT
TTTGATGAAA AGTCTGAGCT CACAATGTTG CTTGGAGAAC TTCCCGAAGA CAAGCAGGAT
CGAGTCGTAC AAATTGTTAG TGAAGCGAAA CAAGCTTTGG GCCAAGGGGA GGAAGATGAG
ATCGAAATCA ACATCGAAGA GCTTCCCGCG GCCACGCTCT GGAAACTTCA CAAATACGTC
AATGGCGTGC TTCGTCCGAA GAAGCGTAAG CTCAACGCCG CTGAGCAGCT TCTTGAGGCG
AAAATGCGTG AAGCGCAAGC CGCGCGCGAG CTTGCGGCTG TCGAGCAAAC ATTGCAGCAG
GTTCAAGAGA CCGGAGGAAG CTACCAAGAC GTCGTTCATC TCAACAGCGC CGGGCCGTCG
GCTCAAAAGC CAGAAAAGAA ACCGGTCGAC GACGACTCCG ATACCGACAC CGATTCCGGA
GATTCGGATT CAGACACTTC GAGCATGGAT AGCGCGGAAG GTGCTGGCAG TAATCCGGAG
AAGCGCGCCG CCGTCACCGG TGCCGCCGCG CCCGTCGACC AGTCGTCTAA CCAGTTCGCC
AAGGAGGCTC CGGGCATCAA ACAAAACGTC TCCAAGGCGG CGGTGAACGT CCAAAATCCG
TCAGGTTGGG AAAATCTGGC GAGTTCTGAC GCGCCAGTGA ACGCGAGCGC GCAAGCGGCG
ACGCAGGATG CCATTCCGGA TGACTTGTGG AATGAGTTCG AAGCCGCGGC TCAACAAAAG
CAACAACTCG ACGAATCCAG AAAAGAGGAC GAGGCGCAGG CGCAAGCCGA GCGCGAGCGA
CTGGAAGCGG AAAAGAAAGC AGCTGAAGAG GCGAAAAAAG TTGCCGAAGA AGCCGCAAAG
CAAGCCGAGG CCAAGGCGCG AGAAGAGGCG CGCGCCAAGG CGCGAGAGGC GCTCGAAAAC
CAAGAGCAAA CCATCGATCT CGAGGAACAA CGCATCGCGA TGAAGCAGTT CGGAGGCGAC
GGTATGGGCG GAATGATCGG ATCCATCGAT CCGAGCAAGC TCAAGCAAGG CTCGGAGTGA
|
|---|
| Protein sequence | MTAVAAAATA PAGAADGEKP DARATEAGDG AMTDAPNTPA EDGAITEAAA AAGANAAAAT
WPANAVSAAR GEILLTLNQS MKAPKGYAYM PAGDYAAFDS NWLESKKRVR RPSAKVDDGM
FASGDDEGGG MFAAPGDDSA KLPEKPDEEC TEEELALRKL QRKEQKRRKK EELAKRLAAI
EEAKTKVAEI EAKKQLQFAR LPPPRPASAR PIKATQPYDG YGVSSYGSKK KGSAANLAGV
KKLRDGRAVT TQRLQKEYEV EQARDARRKE MIRRCREVLI ASKKHKYHKI FLVPVDPKKH
GVPDYFDIIK NPMDMGTVKT KLDTKAYLNP AEFCADMRLI FSNGLLYNGT ASDAGVMTET
VRQLFETAWL NSDLEDYVSI ENEIREHEDI EIRNTPATPI SLEVAVLEDA RAELEKVRRE
IEELKRAKQE VIYKEDDEDD WDDEPMPRPK SRSRGAVKRQ RDPDEDPDFD FDDARMDEDT
YKEYKEEGRI RKEIKRERGF RSEGGYSRPR PAPTPSRDMT FDEKSELTML LGELPEDKQD
RVVQIVSEAK QALGQGEEDE IEINIEELPA ATLWKLHKYV NGVLRPKKRK LNAAEQLLEA
KMREAQAARE LAAVEQTLQQ VQETGGSYQD VVHLNSAGPS AQKPEKKPVD DDSDTDTDSG
DSDSDTSSMD SAEGAGSNPE KRAAVTGAAA PVDQSSNQFA KEAPGIKQNV SKAAVNVQNP
SGWENLASSD APVNASAQAA TQDAIPDDLW NEFEAAAQQK QQLDESRKED EAQAQAERER
LEAEKKAAEE AKKVAEEAAK QAEAKAREEA RAKAREALEN QEQTIDLEEQ RIAMKQFGGD
GMGGMIGSID PSKLKQGSE
|
|---|
| |