| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_12560 |
|---|
| Symbol | |
|---|
| ID | 5001765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 588178 |
|---|
| End bp | 589141 |
|---|
| Gene Length | 964 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640417186 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418056 |
|---|
| Protein GI | 145347186 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.210663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAGT CGAGCAAGGA TAAGCGCGAT ATATACTACC GCAAGGCGAA AGAGGAGGGA
TGGCGCGCGA GGTCGGCGTT CAAGTTGCTG CAAATTGACG AGTCGTTCGA TATTTTTCGA
GACGTGCGAC ACGTCGTGGA TCTGTGCGCG GCGCCCGGGT CGTGGTCGCA GGTTTTGAGT
CGAAAGTTGT ACCTACCCGC GTTGGCGCGA GGGGTCGAGG AGGAAGAGCT GCCGAAGATT
GTCGCCATCG ACTTGCAACC GATGGCGCCG ATCGAGGGCG TGACGACGAT ACAGGGCGAT
ATCACGTCGA TGGACAAAGT GCGCGAGGTC CTGTCGCATT TCGATGGGAA ACACGCGGAT
TTGATCGTCG GCGATGGAGC GCCCGACGTC ACGGGTTTGC ACGATTTGGA TGAGTTTATG
CAGGCGCAGC TCATACTCGC CGGCTTGACG GTGGCGACGC ACATATTGAA ACCAGGCGGA
ACGTTCATAG CGAAGATATT TCGGGGGAAA GACATCAGTT TGCTCTACTC ACAACTGAAA
ATTTTCTTCC CCGAAGTCAC GTGCGCCAAG CCGAAAAGTA GCCGGAATTC TAGCATAGGT
ACGACGATGA TGGAGCCGCG CGCACGTTTT GGAGAAACTA ACCATGTCTC GTTTTGCACC
GCTCGCAGAA GCATTCATAG TGTGTCAGGG TTACTCCCCT CCAGAGGGAT TCGAACCACA
TCAATTGACT CGTATTTTAG AAGCGCGTGC GACGTCTCAC GCCGCTGGAG ACGAGGGCGC
GGCCGTGGGA ACCAAGTCCT GGCCGAACAA TGTGCTCGTG CCGTTTTTGG CGTGCGGCGA
TTTGTCGGGA TACGACGCCG ATCAGAGCTA TGCGTTGGAT GACACCAAAG TCAGACTAAA
ACCGGTGCAA CCGCCGACAA CACCGGCGTA TATGAACGCA ATCAAGCTCT TAAAGAGAAA
GTGA
|
|---|
| Protein sequence | MGKSSKDKRD IYYRKAKEEG WRARSAFKLL QIDESFDIFR DVRHVVDLCA APGSWSQVLS
RKLYLPALAR GVEEEELPKI VAIDLQPMAP IEGVTTIQGD ITSMDKVREV LSHFDGKHAD
LIVGDGAPDV TGLHDLDEFM QAQLILAGLT VATHILKPGG TFIAKIFRGK DISLLYSQLK
IFFPEVTCAK PKSSRNSSIE AFIVCQGYSP PEGFEPHQLT RILEARATSH AAGDEGAAVG
TKSWPNNVLV PFLACGDLSG YDADQSYALD DTKVRLKPVQ PPTTPAYMNA IKLLKRK
|
|---|
| |