Gene OSTLU_12516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12516 
Symbol 
ID5002077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp83027 
End bp84046 
Gene Length1020 bp 
Protein Length339 aa 
Translation table 
GC content54% 
IMG OID640417498 
Productpredicted protein 
Protein accessionXP_001417667 
Protein GI145346380 
COG category[L] Replication, recombination and repair 
COG ID[COG1697] DNA topoisomerase VI, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.343264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.74988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGG CGGCGAAGAG CATCGTGGCG GGCGACGGGT TCGAATACGT GCTGCCGAGT 
CGAGGGGCGA CGGATCAGGT GTACGTGGAG GCGCTCGATC GAATCGTGCT GAAGAATAAG
ACGACGAAAG CGAATTTTGC GGCGGTGTCG AGCGTGCGGA AGGTGACGAT TCTGACGCGG
GTGATGCAGT TGGTGCACGG GGTGCTGAGT CGCGGGATTC ACGTCACGAA GCGGGATTTG
TTTTACACCG ACGTCAAGTT GTTCAAGGAT CAGAAGGATT CCGACGCGGT GTTGGACGAT
ATTTCGTGCA TGCTCGGATG CACGCGTAAC TCGCTGCACG TCGTGGCGTC GGAAAAGGGC
GTCGTCGTCG GACGGTTGCA ATACAAGGAG GACGGCGACG AAATCGACTG CACGAAGATG
GGAGTGGGCG GTAAGGCGAT TCCGAGCAAC ATCGATAAAG TGAGGGATAT GCGCACCGAC
GCCAAGTTCG TACTGCTCGT CGAGAAAGAT GCGGCGTTCA TGCGCCTCGC CGAGGACCGA
TTTTACAACA AGTACCCGTG CATAATCATA ACCGCCAAAG GACAACCCGA CGTCGCGACG
CGCTTGTTCT TGAGCAAGGT GAAGAGAGAT TTGAAAATCC CGGTGTTAGC GCTGGTTGAC
GCCGATCCGT ACGGGTTGAA AATCATCTCA GTGTACATGC AAGGTTCGAA GAACATGGCT
TTCGATAGCG GAAACCTCAC CACGCCCGAT ATCAAATGGC TCGGCGTCCG CCCGAGCGAT
TTGGACAAGT TCAAAATCCC CGAACAGTGT CGCCTAGAGA TGACGGCAAA GGATATTGAA
ACGGGGCATC ACATGCTCAA CGAGGATTTC ATTAAAAGCA ACCCGGAGTG GGTGAAGGAA
ATCAACATCA TGCTCGAAAC GAAAACCAAG GCGGAAATTC AGTCGTTGAG TAGCTACGGC
TTTCAATACC TGAGCGAGGT GTACTTGCCT TTGAAGCTGT TAGAAGGGGA CTGGATTTAG
 
Protein sequence
MIAAAKSIVA GDGFEYVLPS RGATDQVYVE ALDRIVLKNK TTKANFAAVS SVRKVTILTR 
VMQLVHGVLS RGIHVTKRDL FYTDVKLFKD QKDSDAVLDD ISCMLGCTRN SLHVVASEKG
VVVGRLQYKE DGDEIDCTKM GVGGKAIPSN IDKVRDMRTD AKFVLLVEKD AAFMRLAEDR
FYNKYPCIII TAKGQPDVAT RLFLSKVKRD LKIPVLALVD ADPYGLKIIS VYMQGSKNMA
FDSGNLTTPD IKWLGVRPSD LDKFKIPEQC RLEMTAKDIE TGHHMLNEDF IKSNPEWVKE
INIMLETKTK AEIQSLSSYG FQYLSEVYLP LKLLEGDWI