Gene OSTLU_10510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_10510 
Symbol 
ID5001676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp106339 
End bp106584 
Gene Length246 bp 
Protein Length82 aa 
Translation table 
GC content55% 
IMG OID640417097 
Productpredicted protein 
Protein accessionXP_001417675 
Protein GI145346398 
COG category[R] General function prediction only 
COG ID[COG5084] Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00150742 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.745145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGTAAAAACT ACCGTCAAAC CGTGTGCAGG CACTGGCTGC GAAACTTGTG CATGAAGGGC 
AACGCGTGCG GGTTCCTGCA CCAGTTCGAC AAGTCCCGCA TGCCCACGTG TCGGTTTTTC
GCAAAGTACG GCGAGTGCAA GGAACCGGAT TGTCCGTACA AGCACTCGTT GGAGGACATG
AAGGATTGCA ACATGTACAA GCTCGGGTTC TGCATTCACG GGTCGCTGTG CAGGTTTAGA
CACGTG
 
Protein sequence
RKNYRQTVCR HWLRNLCMKG NACGFLHQFD KSRMPTCRFF AKYGECKEPD CPYKHSLEDM 
KDCNMYKLGF CIHGSLCRFR HV