Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_87146 |
Symbol | |
ID | 5001585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | + |
Start bp | 889813 |
End bp | 891255 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | |
GC content | 60% |
IMG OID | 640417006 |
Product | predicted protein |
Protein accession | XP_001417385 |
Protein GI | 145345795 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000232549 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGAGG AAGAAGCGGC GGCGGCGAGA AACGATCCTG ACTCCGAGGC GACGAAGATG TTTACCGGCG AAAACACCGG TTTGGACTTT GACCTGTACG ACGACATTCC CGTGGAGACG AGCGGACGCG ACGTGCCGGA GCCCATCACT TCGTTCGTCG ACCTCGACCT CGGGGCGGCC GTGAACACGA ACATCAAGAG ATGCAAGTTT AAGAATCCGA CGCCGGTGCA AAAGTACGCC ATTCCAGCTT CGCTGGCGGG AAGAGATTTA ATGGCGTGCG CGCAGACGGG TTCCGGTAAA ACGGCGGCGT TTTGCTTTCC CATCATCGCC GGTATCTTGA AGCGCGGTCT TCAAGGCGGT CATATGAACC GCAAGACGTA TCCTCTCGCG CTCGTGCTTT CGCCGACGCG CGAATTGGCG AGCCAGATTC ACGAAGAATC GCGGAAGTTC GCGTACCAAA CCGGCGTCGC CTCGTGCGTC ATCTACGGTG GCGCTCCGGC GGTGGAACAA TTCCGCGCCA TGGAACGCGG GTGCGACATT CTCGTCGCCA CGCCGGGTCG TTTGATCGAT CTCATCGATC GCGCTAAGAT CTCGTTGAGC AGAGTTCAAT ATCTCGCGCT CGACGAGGCG GATCGCATGT TGGATATGGG TTTCGAGCCG CAAATTCGAC AAATCGTCGA CGAGCGCGAC ATGCCGCGAT GTGGCGAGCG TCAAACGATG TTGTTCTCCG CAACGTTCCC GAGGGAAATC CAGCGAATGG CTTCGGACTT CTTGGACGAT TACGTCTTTC TCACGGTCGG TCGCGTCGGC TCTTCGCACG CGTTGATCAC GCAATCCGTC GAGCGCGTGA CTTCGTACCA CGAAAAGAGC AATATGCTTC TCGATTTGGT CGAAGCCGTG CCGGGTTTGA CTTTGGTTTT CGTCGAAACG AAGCGAGGTG CGGACCAGCT CGAGGATTTC TTGTACCAAA ACGGTAAGCC CGCGACGAGC ATCCACGGCG ATCGCACGCA GCAGGAGCGC GAGGCGGCGT TGAAATCCTT CCGAGCGGGT AAGACGCCCA TCCTCGTCGC CACGGACGTC GCGGCGAGAG GTTTGGATAT TCCTCACGTC ACCCACGTCA TCAACTTTGA CTTGCCATCG GATATCGACG ACTACACGCA CCGCATCGGT CGTACCGGGC GCGCGGGGAA GAAGGGTCGG GCGACGGCGC TGTTTTTAGA ATCCAAAGAC GGCCAAATGG CTCGCCCGTT GACGGAGCTC ATGAGCGAGG CGAACCAGGA AGTGCCGACG TGGTTGACGC AAATCTCTGG CCATTCCTTC GGCGGTGGTG GACGTCGTCG CGGTGGTGGT GGCGGGAATA GATTCGGCGG TCGCGACTAC CGCGGCGGCG GCGGCGGCGG CGGCGGCGGC GGCGGCGGCG GCGGCGGCTG GGGCCGCGAG TAA
|
Protein sequence | MEEEEAAAAR NDPDSEATKM FTGENTGLDF DLYDDIPVET SGRDVPEPIT SFVDLDLGAA VNTNIKRCKF KNPTPVQKYA IPASLAGRDL MACAQTGSGK TAAFCFPIIA GILKRGLQGG HMNRKTYPLA LVLSPTRELA SQIHEESRKF AYQTGVASCV IYGGAPAVEQ FRAMERGCDI LVATPGRLID LIDRAKISLS RVQYLALDEA DRMLDMGFEP QIRQIVDERD MPRCGERQTM LFSATFPREI QRMASDFLDD YVFLTVGRVG SSHALITQSV ERVTSYHEKS NMLLDLVEAV PGLTLVFVET KRGADQLEDF LYQNGKPATS IHGDRTQQER EAALKSFRAG KTPILVATDV AARGLDIPHV THVINFDLPS DIDDYTHRIG RTGRAGKKGR ATALFLESKD GQMARPLTEL MSEANQEVPT WLTQISGHSF GGGGRRRGGG GGNRFGGRDY RGGGGGGGGG GGGGGGWGRE
|
| |