| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_87130 |
|---|
| Symbol | |
|---|
| ID | 5001658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | - |
|---|
| Start bp | 841605 |
|---|
| End bp | 842696 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | |
|---|
| GC content | 67% |
|---|
| IMG OID | 640417079 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417619 |
|---|
| Protein GI | 145346278 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0000907307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCAAGT TTCGCCTGAG CGCGTTCGTC GTGAGCACGG CGGCGGCGGG GTTCGTGCTC
GGCTCGCCGA CGAGCATGGA CGCGGGAAAA TTAGCGGCGA CGTGCGCGGG GACGATGCTG
TGCAGCGCGA GCGCGAACGC GCTGAATCAG GTGGTGGAGC GGGCGCCGGA CGGGACGATG
CGACGCACGG CGGGTCGGCC GTTGCCGAGC GGAAGGTGCG GCGCCGGGGT CGCGATGGCG
TTCGCGGGCG CGTGCGCGGT GAGTGGGGTG GGTGTTTTAG CGATCGCGAC GAACGAGACG
ACGACGGCGC TGGGGGCGGG GAACATCGCG CTGTACGCGG GGGCGTACAC GGCGCTCAAG
CGGGTGCACT TTCTGAACAC GTGGGTGGGG GCGGTCGTGG GGGCGATTCC CCCGCTCATG
GGTTGGGCGG CCGCGAACGA GCTCGGGACG TTGGATCCAG GGGCGTTCGT GTTGGCGTCG
GCGCTGTATT TGTGGCAGAT GCCGCATTTT ATGGCGTTGG CGTACATGGG GAAGGACGAC
TACGTCAACG GGGGGTATCG CATGTTGTCG CATCCAATGT TTGACAAAAC GGGACGTCGC
GTCGCGGGCG TGGCGGTGAG AAACTCGTTG GCACTGCTCC CACTCGGCGT GTTAGCGTGC
GCGATGGGGG TGACGACGTC GCCGTTCGCG TACGAGACGC TCGCGCTCGG CGCGCCGCTC
GTCGCCGCGG CGGCGGCGTT TTACGCGGCG CCGTCGTTTC CAGCCGCTCG GCGCATGTTC
TTCGGCTCTC TGCTGTACTT GCCCGCGTTT CAAGCTCTAG CGTGTTTGCA CCGAGTGCCT
CGCGATCACA CCGTGGACGC GTACGAGTCT TTGAGGCAAG CCAGCGCCAA TTTCCCGTGG
CACTGCGTGC CGTTCGCGGC GGCGTACGAT TGGTCGCCCG AACGAGAGAG ATTGAAGCAG
TTCAGATCGC GCGCCTTGGG ACCGGCGCTG AGTGAAACCT CGGTTGCGCC GTTCCCTTTC
CTGCCCCTGC CCATCCCGAG TTGTCCGCAC GACCGCGCCT ACGCGCAGGG CGGCGAGTCG
CGCGCTAGTT AG
|
|---|
| Protein sequence | LSKFRLSAFV VSTAAAGFVL GSPTSMDAGK LAATCAGTML CSASANALNQ VVERAPDGTM
RRTAGRPLPS GRCGAGVAMA FAGACAVSGV GVLAIATNET TTALGAGNIA LYAGAYTALK
RVHFLNTWVG AVVGAIPPLM GWAAANELGT LDPGAFVLAS ALYLWQMPHF MALAYMGKDD
YVNGGYRMLS HPMFDKTGRR VAGVAVRNSL ALLPLGVLAC AMGVTTSPFA YETLALGAPL
VAAAAAFYAA PSFPAARRMF FGSLLYLPAF QALACLHRVP RDHTVDAYES LRQASANFPW
HCVPFAAAYD WSPERERLKQ FRSRALGPAL SETSVAPFPF LPLPIPSCPH DRAYAQGGES
RAS
|
|---|
| |